Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030089.1-P | Field mustard | nucleus | 87.77 | 96.31 |
| CDY15678 | Canola | nucleus | 95.72 | 95.72 |
| AT1G28310.2 | Thale cress | nucleus | 87.46 | 85.37 |
| CDY70666 | Canola | nucleus | 77.06 | 84.85 |
| CDY72049 | Canola | nucleus | 76.45 | 84.18 |
| CDX90142 | Canola | nucleus | 79.2 | 81.96 |
| CDY35729 | Canola | nucleus | 70.95 | 77.59 |
| CDY70840 | Canola | nucleus | 13.46 | 38.94 |
| CDY08775 | Canola | nucleus | 17.43 | 29.08 |
| CDY07781 | Canola | nucleus | 18.04 | 27.57 |
| VIT_10s0003g00040.t01 | Wine grape | nucleus | 23.55 | 25.0 |
| CDX73385 | Canola | nucleus | 22.94 | 24.83 |
| KRH10907 | Soybean | nucleus | 26.61 | 24.65 |
| CDY69145 | Canola | nucleus, plastid | 23.55 | 24.44 |
| CDY31568 | Canola | nucleus | 19.27 | 24.42 |
| CDX87189 | Canola | nucleus | 18.65 | 24.4 |
| CDY70312 | Canola | nucleus | 20.8 | 23.94 |
| CDY09221 | Canola | nucleus | 18.65 | 23.64 |
| CDX81292 | Canola | nucleus | 20.18 | 23.4 |
| CDX80191 | Canola | nucleus | 18.35 | 23.35 |
| CDX71050 | Canola | nucleus | 18.04 | 23.32 |
| CDY53379 | Canola | nucleus | 15.6 | 23.29 |
| KRH21402 | Soybean | nucleus | 25.38 | 23.25 |
| CDY16836 | Canola | nucleus | 18.96 | 23.22 |
| CDY40813 | Canola | nucleus | 19.88 | 22.97 |
| CDY15624 | Canola | nucleus | 23.24 | 22.75 |
| CDY42836 | Canola | nucleus | 19.88 | 22.73 |
| CDY37834 | Canola | nucleus | 21.1 | 22.7 |
| CDY51722 | Canola | nucleus | 19.27 | 22.66 |
| CDY07156 | Canola | nucleus | 19.27 | 22.58 |
| CDY33948 | Canola | nucleus | 20.8 | 22.52 |
| CDY40213 | Canola | nucleus | 24.16 | 22.25 |
| CDY70838 | Canola | nucleus | 20.8 | 22.22 |
| CDX79743 | Canola | nucleus | 19.88 | 22.18 |
| CDX88742 | Canola | nucleus | 18.35 | 21.66 |
| CDY02191 | Canola | nucleus | 19.27 | 21.43 |
| CDX93365 | Canola | nucleus | 20.18 | 21.36 |
| CDX86775 | Canola | nucleus | 20.18 | 21.22 |
| CDY65260 | Canola | nucleus | 19.88 | 21.04 |
| CDX91370 | Canola | nucleus | 20.8 | 20.92 |
| CDX74947 | Canola | nucleus | 20.8 | 20.92 |
| CDX71704 | Canola | nucleus | 21.41 | 20.9 |
| CDY29082 | Canola | nucleus | 15.29 | 20.83 |
| CDX76102 | Canola | nucleus | 24.16 | 20.73 |
| CDY59600 | Canola | nucleus | 15.29 | 20.49 |
| EER97271 | Sorghum | nucleus | 22.02 | 20.34 |
| CDX90602 | Canola | nucleus | 14.98 | 20.33 |
| CDX77212 | Canola | nucleus | 21.1 | 20.29 |
| CDY61965 | Canola | nucleus | 19.27 | 20.26 |
| CDY41539 | Canola | nucleus | 22.63 | 20.22 |
| CDY64622 | Canola | nucleus | 19.88 | 20.12 |
| GSMUA_Achr10P... | Banana | nucleus | 21.41 | 20.11 |
| CDY06274 | Canola | nucleus | 19.27 | 20.06 |
| CDY31735 | Canola | nucleus | 21.1 | 20.06 |
| CDX80030 | Canola | nucleus | 22.32 | 20.05 |
| CDX78095 | Canola | nucleus | 14.68 | 19.83 |
| CDX95706 | Canola | nucleus | 22.32 | 19.78 |
| CDY50231 | Canola | nucleus | 15.29 | 19.76 |
| Zm00001d021591_P001 | Maize | nucleus | 21.71 | 19.72 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 21.41 | 19.72 |
| CDY04620 | Canola | nucleus | 15.29 | 19.68 |
| TraesCS2A01G225900.1 | Wheat | nucleus, plastid | 21.41 | 19.66 |
| TraesCS2D01G231600.1 | Wheat | nucleus | 21.41 | 19.66 |
| CDX95139 | Canola | nucleus | 20.18 | 19.64 |
| CDY00373 | Canola | nucleus | 15.6 | 19.62 |
| CDY61064 | Canola | nucleus | 15.6 | 19.54 |
| CDX89134 | Canola | extracellular, vacuole | 20.8 | 19.54 |
| CDY72657 | Canola | nucleus | 17.43 | 19.52 |
| CDY27314 | Canola | nucleus | 21.41 | 19.44 |
| CDY57876 | Canola | nucleus | 21.41 | 19.39 |
| PGSC0003DMT400076447 | Potato | nucleus | 23.55 | 19.35 |
| CDX83357 | Canola | nucleus | 22.02 | 19.25 |
| CDY40358 | Canola | nucleus | 19.57 | 19.22 |
| CDX77184 | Canola | nucleus | 14.98 | 19.14 |
| Solyc02g077950.1.1 | Tomato | nucleus | 22.02 | 19.0 |
| CDY61727 | Canola | nucleus | 21.71 | 18.98 |
| CDY08392 | Canola | nucleus | 19.57 | 18.93 |
| CDY70704 | Canola | nucleus | 21.1 | 18.9 |
| Zm00001d006463_P001 | Maize | plastid | 19.88 | 18.52 |
| CDY55422 | Canola | nucleus | 22.02 | 17.96 |
| CDY55549 | Canola | nucleus | 22.02 | 17.91 |
| CDY04855 | Canola | nucleus | 21.71 | 17.49 |
| CDX80822 | Canola | nucleus | 21.71 | 17.49 |
| CDY71684 | Canola | nucleus | 17.74 | 17.31 |
| CDY71763 | Canola | nucleus | 17.74 | 16.91 |
| CDX92613 | Canola | nucleus | 17.74 | 16.91 |
| CDY03494 | Canola | nucleus | 17.74 | 16.86 |
| CDX87270 | Canola | nucleus | 17.43 | 16.72 |
| CDY00341 | Canola | nucleus | 18.65 | 16.58 |
| CDY16754 | Canola | nucleus | 17.13 | 16.47 |
| CDX84369 | Canola | nucleus | 18.35 | 16.17 |
| CDY35454 | Canola | nucleus | 16.82 | 16.08 |
| CDY24798 | Canola | nucleus | 17.43 | 12.58 |
| CDY08776 | Canola | nucleus | 3.06 | 11.63 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078JJD9 | UniProt:A0A078JJD9 | EnsemblPlants:CDY66590 | ProteinID:CDY66590 | ProteinID:CDY66590.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00054614001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF79 | UniParc:UPI0004EC4137 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng51540DBnaCnng51540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJD9]
Coordinates
chrLK035347:-:179..1903
Molecular Weight (calculated)
35497.5 Da
IEP (calculated)
9.723
GRAVY (calculated)
-0.627
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGNCDQKKK MPSISSPNTI PLASMQSKNM IVAPSHKQQQ QQQAHQPQPQ LKCPRCDSSN TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGSY
101: RKNKRVKRPA TAASTVSKTT SSSPNHQISH FSSMNHHPML YGLSDHVNSC NSLPMIPSRF NDSSKTSSSG LESEFFSSGF SGLGALGLGF PHHMSHDHTA
201: INGGFIDNST ANKPFLLSGL FGSSVSSSSS NLVQHPHKPM NNGGEMMGQS HLQTLASLQD LHVGGNNEDV NKEGKLGQIS GTISGFMSPS SLDPSNYNNI
301: WNNASVVNGE WLDSTNNNVG SSLTSLI
101: RKNKRVKRPA TAASTVSKTT SSSPNHQISH FSSMNHHPML YGLSDHVNSC NSLPMIPSRF NDSSKTSSSG LESEFFSSGF SGLGALGLGF PHHMSHDHTA
201: INGGFIDNST ANKPFLLSGL FGSSVSSSSS NLVQHPHKPM NNGGEMMGQS HLQTLASLQD LHVGGNNEDV NKEGKLGQIS GTISGFMSPS SLDPSNYNNI
301: WNNASVVNGE WLDSTNNNVG SSLTSLI
001: MFGNCDQNKK MPIISSPNTN PLASMQSKNM IVASSHQQQQ QQQPQQPQPQ LKCPRCDSSN TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGSY
101: RKNKRVKRPS TATTTTASTV STTNSSSPNN PHQISHFSSM NHHPLFYGLS DHMSSCNNNL PMIPSRFSDS SKTCSSSGLE SEFLSSGFSS LSALGLGLPH
201: QMSHDHTING SFINNSTTNK PFLLSGLFGS SMSSSSTLLQ HPHKPMNNGG DMLGQSHLQT LASLQDLHVG GNNEDMKYKE GKLDQISGNI NGFMSSSSSL
301: DPSNYNNMWN NASVVNGAWL DPTNNNVGSS LTSLI
101: RKNKRVKRPS TATTTTASTV STTNSSSPNN PHQISHFSSM NHHPLFYGLS DHMSSCNNNL PMIPSRFSDS SKTCSSSGLE SEFLSSGFSS LSALGLGLPH
201: QMSHDHTING SFINNSTTNK PFLLSGLFGS SMSSSSTLLQ HPHKPMNNGG DMLGQSHLQT LASLQDLHVG GNNEDMKYKE GKLDQISGNI NGFMSSSSSL
301: DPSNYNNMWN NASVVNGAWL DPTNNNVGSS LTSLI
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G28310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.