Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019247.1-P | Field mustard | nucleus | 100.0 | 97.67 |
| CDX92613 | Canola | nucleus | 99.1 | 96.79 |
| CDY71763 | Canola | nucleus | 98.51 | 96.21 |
| CDY03494 | Canola | nucleus | 89.25 | 86.92 |
| CDY72657 | Canola | nucleus | 75.52 | 86.64 |
| CDY35454 | Canola | nucleus | 86.27 | 84.5 |
| AT4G24060.1 | Thale cress | nucleus | 85.37 | 83.63 |
| CDY70840 | Canola | nucleus | 24.48 | 72.57 |
| CDY24798 | Canola | nucleus | 85.37 | 63.13 |
| KRG92523 | Soybean | nucleus | 45.37 | 50.33 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 21.79 | 45.34 |
| KRH34272 | Soybean | nucleus | 44.48 | 44.35 |
| CDY08392 | Canola | nucleus | 43.88 | 43.49 |
| Solyc03g082840.2.1 | Tomato | nucleus | 32.54 | 42.25 |
| PGSC0003DMT400047705 | Potato | nucleus | 32.24 | 41.38 |
| VIT_15s0046g00150.t01 | Wine grape | nucleus | 36.72 | 38.92 |
| GSMUA_Achr11P... | Banana | nucleus | 33.43 | 38.1 |
| CDX71704 | Canola | nucleus | 35.82 | 35.82 |
| CDX86775 | Canola | nucleus | 32.84 | 35.37 |
| CDX95706 | Canola | nucleus | 38.81 | 35.23 |
| CDY61727 | Canola | nucleus | 39.1 | 35.03 |
| CDY64622 | Canola | nucleus | 33.73 | 34.98 |
| CDX80030 | Canola | nucleus | 37.91 | 34.89 |
| CDX83357 | Canola | nucleus | 38.81 | 34.76 |
| CDY27314 | Canola | nucleus | 37.31 | 34.72 |
| CDY41539 | Canola | nucleus | 37.91 | 34.7 |
| CDY57876 | Canola | nucleus | 35.82 | 33.24 |
| CDX89134 | Canola | extracellular, vacuole | 34.03 | 32.76 |
| CDY51722 | Canola | nucleus | 27.16 | 32.73 |
| CDY07156 | Canola | nucleus | 26.87 | 32.26 |
| CDY07781 | Canola | nucleus | 19.1 | 29.91 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 22.69 | 29.57 |
| CDY53379 | Canola | nucleus | 18.21 | 27.85 |
| CDX87189 | Canola | nucleus | 20.6 | 27.6 |
| CDY29082 | Canola | nucleus | 19.1 | 26.67 |
| CDX80191 | Canola | nucleus | 20.3 | 26.46 |
| CDY31568 | Canola | nucleus | 20.0 | 25.97 |
| CDY16836 | Canola | nucleus | 20.6 | 25.84 |
| CDX90602 | Canola | nucleus | 18.51 | 25.73 |
| CDY50231 | Canola | nucleus | 19.4 | 25.69 |
| CDX71050 | Canola | nucleus | 19.4 | 25.69 |
| CDY04620 | Canola | nucleus | 19.4 | 25.59 |
| CDX79743 | Canola | nucleus | 22.09 | 25.26 |
| CDY02191 | Canola | nucleus | 22.09 | 25.17 |
| CDX73385 | Canola | nucleus | 22.69 | 25.17 |
| CDY09221 | Canola | nucleus | 19.1 | 24.81 |
| CDX78095 | Canola | nucleus | 17.91 | 24.79 |
| CDX77184 | Canola | nucleus | 18.81 | 24.61 |
| CDY59600 | Canola | nucleus | 17.91 | 24.59 |
| CDY08775 | Canola | nucleus | 14.33 | 24.49 |
| CDY16754 | Canola | nucleus | 24.78 | 24.41 |
| CDY40813 | Canola | nucleus | 20.6 | 24.38 |
| CDX87270 | Canola | nucleus | 24.78 | 24.34 |
| CDY65260 | Canola | nucleus | 22.39 | 24.27 |
| CDY00373 | Canola | nucleus | 18.81 | 24.23 |
| CDX88742 | Canola | nucleus | 20.0 | 24.19 |
| CDY00341 | Canola | nucleus | 26.57 | 24.18 |
| CDY61064 | Canola | nucleus | 18.81 | 24.14 |
| CDY69145 | Canola | nucleus, plastid | 22.69 | 24.13 |
| CDX93365 | Canola | nucleus | 22.09 | 23.95 |
| CDY42836 | Canola | nucleus | 20.3 | 23.78 |
| CDX74947 | Canola | nucleus | 22.99 | 23.69 |
| CDX84369 | Canola | nucleus | 25.97 | 23.45 |
| CDX91370 | Canola | nucleus | 22.39 | 23.08 |
| CDY40213 | Canola | nucleus | 22.39 | 21.13 |
| CDX95139 | Canola | nucleus | 20.6 | 20.54 |
| CDX76102 | Canola | nucleus | 23.28 | 20.47 |
| CDY15624 | Canola | nucleus | 20.3 | 20.36 |
| CDX77212 | Canola | nucleus | 20.6 | 20.29 |
| CDY31735 | Canola | nucleus | 20.6 | 20.06 |
| CDY72049 | Canola | nucleus | 17.61 | 19.87 |
| CDY70666 | Canola | nucleus | 17.61 | 19.87 |
| CDY40358 | Canola | nucleus | 19.4 | 19.52 |
| CDY35729 | Canola | nucleus | 17.31 | 19.4 |
| CDY70704 | Canola | nucleus | 20.6 | 18.9 |
| CDY33948 | Canola | nucleus | 17.01 | 18.87 |
| CDY37834 | Canola | nucleus | 17.01 | 18.75 |
| CDX90142 | Canola | nucleus | 17.61 | 18.67 |
| CDY70838 | Canola | nucleus | 17.01 | 18.63 |
| CDY06274 | Canola | nucleus | 17.31 | 18.47 |
| CDY55422 | Canola | nucleus | 22.09 | 18.45 |
| CDY61965 | Canola | nucleus | 17.01 | 18.33 |
| CDY70312 | Canola | nucleus | 15.52 | 18.31 |
| CDY55549 | Canola | nucleus | 21.79 | 18.16 |
| CDX80822 | Canola | nucleus | 21.79 | 17.98 |
| CDY66590 | Canola | nucleus | 17.31 | 17.74 |
| CDY04855 | Canola | nucleus | 21.49 | 17.73 |
| CDX81292 | Canola | nucleus | 14.93 | 17.73 |
| CDY15678 | Canola | nucleus | 17.01 | 17.43 |
| CDY08776 | Canola | nucleus | 2.09 | 8.14 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078JYC1 | UniProt:A0A078JYC1 | EnsemblPlants:CDY71684 | ProteinID:CDY71684 | ProteinID:CDY71684.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00018083001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF78 | UniParc:UPI0004EE97DD | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng38460DBnaAnng38460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYC1]
Coordinates
chrLK046932:-:745..2440
Molecular Weight (calculated)
36462.0 Da
IEP (calculated)
7.581
GRAVY (calculated)
-0.838
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTAQWPQEI VVKPLEEIVT NTCPKPQPSQ PQEPTPDGAA GGVERKARPE KDQAINCPRC NSTNTKFCYY NNYSLTQPRF FCKGCRRYWT EGGSLRNIPV
101: GGGSRKNKRS HSSSISSSDI GNNHSKHRSD QHHHHLMSMS QQGLTGQNPK FLETTQQDLN LGFPPPHGLI RTNFTDLIHN IGNNNKSTNN LLLSSSCSAT
201: SAMATSPLDF IRNNNSNNGN SSFMGFPVHN QDPTSGGFSM QDHYKPCNSN TTLLGFSLDH HRNNDFPGGF QGGEGGDDVN GRPLFPFEDL KLPVSSSSAT
301: SNVDINDHQK QASGGDAAAT SGGYWTGMLS GGSWC
101: GGGSRKNKRS HSSSISSSDI GNNHSKHRSD QHHHHLMSMS QQGLTGQNPK FLETTQQDLN LGFPPPHGLI RTNFTDLIHN IGNNNKSTNN LLLSSSCSAT
201: SAMATSPLDF IRNNNSNNGN SSFMGFPVHN QDPTSGGFSM QDHYKPCNSN TTLLGFSLDH HRNNDFPGGF QGGEGGDDVN GRPLFPFEDL KLPVSSSSAT
301: SNVDINDHQK QASGGDAAAT SGGYWTGMLS GGSWC
001: MDTAQWPQEI VVKPLEEIVT NTCPKPQPQP LQPQQPPSVG GERKARPEKD QAVNCPRCNS TNTKFCYYNN YSLTQPRYFC KGCRRYWTEG GSLRNIPVGG
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
Arabidopsis Description
DOF4.6Dof zinc finger protein DOF4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.