Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72657 | Canola | nucleus | 83.14 | 97.95 |
| Bra013758.1-P | Field mustard | nucleus | 93.02 | 95.24 |
| CDX92613 | Canola | nucleus | 89.53 | 89.8 |
| CDY71684 | Canola | nucleus | 86.92 | 89.25 |
| CDY71763 | Canola | nucleus | 88.95 | 89.21 |
| AT4G24060.1 | Thale cress | nucleus | 84.88 | 85.38 |
| CDY35454 | Canola | nucleus | 82.56 | 83.04 |
| CDY70840 | Canola | nucleus | 23.55 | 71.68 |
| CDY24798 | Canola | nucleus | 83.72 | 63.58 |
| KRG92523 | Soybean | nucleus | 44.19 | 50.33 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 21.51 | 45.96 |
| KRH34272 | Soybean | nucleus | 43.6 | 44.64 |
| CDY08392 | Canola | nucleus | 42.15 | 42.9 |
| Solyc03g082840.2.1 | Tomato | nucleus | 31.98 | 42.64 |
| PGSC0003DMT400047705 | Potato | nucleus | 31.69 | 41.76 |
| VIT_15s0046g00150.t01 | Wine grape | nucleus | 36.34 | 39.56 |
| GSMUA_Achr11P... | Banana | nucleus | 32.27 | 37.76 |
| CDX95706 | Canola | nucleus | 38.95 | 36.31 |
| CDX83357 | Canola | nucleus | 38.95 | 35.83 |
| CDX71704 | Canola | nucleus | 34.88 | 35.82 |
| CDX80030 | Canola | nucleus | 37.5 | 35.44 |
| CDY61727 | Canola | nucleus | 38.37 | 35.29 |
| CDY41539 | Canola | nucleus | 37.5 | 35.25 |
| CDY27314 | Canola | nucleus | 36.63 | 35.0 |
| CDX86775 | Canola | nucleus | 31.4 | 34.73 |
| CDY64622 | Canola | nucleus | 32.27 | 34.37 |
| CDY57876 | Canola | nucleus | 34.88 | 33.24 |
| CDY51722 | Canola | nucleus | 26.16 | 32.37 |
| CDX89134 | Canola | extracellular, vacuole | 32.56 | 32.18 |
| CDY07156 | Canola | nucleus | 25.87 | 31.9 |
| CDY07781 | Canola | nucleus | 18.6 | 29.91 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 21.8 | 29.18 |
| CDY53379 | Canola | nucleus | 18.02 | 28.31 |
| CDX87189 | Canola | nucleus | 20.35 | 28.0 |
| CDY29082 | Canola | nucleus | 18.9 | 27.08 |
| CDY50231 | Canola | nucleus | 19.77 | 26.88 |
| CDY04620 | Canola | nucleus | 19.77 | 26.77 |
| CDY16836 | Canola | nucleus | 20.64 | 26.59 |
| CDX80191 | Canola | nucleus | 19.77 | 26.46 |
| CDX90602 | Canola | nucleus | 18.31 | 26.14 |
| CDX71050 | Canola | nucleus | 19.19 | 26.09 |
| CDY31568 | Canola | nucleus | 19.48 | 25.97 |
| CDY02191 | Canola | nucleus | 22.09 | 25.85 |
| CDX73385 | Canola | nucleus | 22.67 | 25.83 |
| CDX79743 | Canola | nucleus | 21.8 | 25.6 |
| CDY00373 | Canola | nucleus | 19.19 | 25.38 |
| CDY16754 | Canola | nucleus | 25.0 | 25.29 |
| CDY61064 | Canola | nucleus | 19.19 | 25.29 |
| CDX87270 | Canola | nucleus | 25.0 | 25.22 |
| CDY40813 | Canola | nucleus | 20.64 | 25.09 |
| CDX77184 | Canola | nucleus | 18.6 | 25.0 |
| CDY08775 | Canola | nucleus | 14.24 | 25.0 |
| CDY09221 | Canola | nucleus | 18.6 | 24.81 |
| CDX78095 | Canola | nucleus | 17.44 | 24.79 |
| CDY69145 | Canola | nucleus, plastid | 22.67 | 24.76 |
| CDY00341 | Canola | nucleus | 26.45 | 24.73 |
| CDY65260 | Canola | nucleus | 22.09 | 24.6 |
| CDY59600 | Canola | nucleus | 17.44 | 24.59 |
| CDX88742 | Canola | nucleus | 19.77 | 24.55 |
| CDY42836 | Canola | nucleus | 20.35 | 24.48 |
| CDX93365 | Canola | nucleus | 21.8 | 24.27 |
| CDX84369 | Canola | nucleus | 26.16 | 24.26 |
| CDX74947 | Canola | nucleus | 22.67 | 24.0 |
| CDX91370 | Canola | nucleus | 22.09 | 23.38 |
| CDY40213 | Canola | nucleus | 22.38 | 21.69 |
| CDY15624 | Canola | nucleus | 20.93 | 21.56 |
| CDX76102 | Canola | nucleus | 23.55 | 21.26 |
| CDX95139 | Canola | nucleus | 20.64 | 21.13 |
| CDY31735 | Canola | nucleus | 20.93 | 20.93 |
| CDX77212 | Canola | nucleus | 20.64 | 20.88 |
| CDY35729 | Canola | nucleus | 17.44 | 20.07 |
| CDY40358 | Canola | nucleus | 19.19 | 19.82 |
| CDY33948 | Canola | nucleus | 17.15 | 19.54 |
| CDY72049 | Canola | nucleus | 16.86 | 19.53 |
| CDY70666 | Canola | nucleus | 16.86 | 19.53 |
| CDY37834 | Canola | nucleus | 17.15 | 19.41 |
| CDX90142 | Canola | nucleus | 17.73 | 19.3 |
| CDY70838 | Canola | nucleus | 17.15 | 19.28 |
| CDY70704 | Canola | nucleus | 20.35 | 19.18 |
| CDY70312 | Canola | nucleus | 15.7 | 19.01 |
| CDY61965 | Canola | nucleus | 17.15 | 18.97 |
| CDY06274 | Canola | nucleus | 17.15 | 18.79 |
| CDY55422 | Canola | nucleus | 21.51 | 18.45 |
| CDY55549 | Canola | nucleus | 21.22 | 18.16 |
| CDX81292 | Canola | nucleus | 14.83 | 18.09 |
| CDX80822 | Canola | nucleus | 21.22 | 17.98 |
| CDY66590 | Canola | nucleus | 16.86 | 17.74 |
| CDY04855 | Canola | nucleus | 20.93 | 17.73 |
| CDY15678 | Canola | nucleus | 16.57 | 17.43 |
| CDY08776 | Canola | nucleus | 2.33 | 9.3 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078ES43 | EnsemblPlants:CDY03494 | ProteinID:CDY03494 | ProteinID:CDY03494.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00116168001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 |
| PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF78 | UniParc:UPI0004EE6EE0 | InterPro:Znf_Dof | SEG:seg |
Description
BnaC01g15880D
Coordinates
chrLK031943:-:806325..807800
Molecular Weight (calculated)
37479.0 Da
IEP (calculated)
7.636
GRAVY (calculated)
-0.884
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTAQWPQQE MVVKPLEEIV TNTCPKPQPS QPQQPTPDGA AGGVERKARP EKDQAVNCPR CNSINTKFCY YNNYSLTQPR FFCKGCRRYW TEGGSLRNIP
101: VGGGSRKNKR SHSSSVSSSS DINKNHSDST QPATKKHHSD HHHLISMSQQ GLTGQNPKFY ETTQQDLNLG FPPHGLIRTN FTDLIHNIGN NNKSTNNPLT
201: SSSTTSAMAV SSLDLIRNNT SNNGSSSFMG FPFHNQDPTS GGFSMQDHYK PCNSNTTLLG FSLDHHHNNG FHGGFQEGEG GGEAGDDVNG RHLFPFEDLK
301: LPVSSSSATI NVDINDNQKR ASGGDASANS GGYWTGMLNG GSWC
101: VGGGSRKNKR SHSSSVSSSS DINKNHSDST QPATKKHHSD HHHLISMSQQ GLTGQNPKFY ETTQQDLNLG FPPHGLIRTN FTDLIHNIGN NNKSTNNPLT
201: SSSTTSAMAV SSLDLIRNNT SNNGSSSFMG FPFHNQDPTS GGFSMQDHYK PCNSNTTLLG FSLDHHHNNG FHGGFQEGEG GGEAGDDVNG RHLFPFEDLK
301: LPVSSSSATI NVDINDNQKR ASGGDASANS GGYWTGMLNG GSWC
001: MDTAQWPQEI VVKPLEEIVT NTCPKPQPQP LQPQQPPSVG GERKARPEKD QAVNCPRCNS TNTKFCYYNN YSLTQPRYFC KGCRRYWTEG GSLRNIPVGG
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
Arabidopsis Description
DOF4.6Dof zinc finger protein DOF4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.