Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35454 | Canola | nucleus | 73.95 | 97.95 |
| Bra010548.1-P | Field mustard | nucleus | 74.39 | 95.74 |
| CDY72657 | Canola | nucleus | 56.73 | 88.01 |
| CDX92613 | Canola | nucleus | 64.9 | 85.71 |
| CDY71684 | Canola | nucleus | 63.13 | 85.37 |
| CDY71763 | Canola | nucleus | 64.46 | 85.13 |
| CDY03494 | Canola | nucleus | 63.58 | 83.72 |
| AT4G24060.1 | Thale cress | nucleus | 62.91 | 83.33 |
| CDY70840 | Canola | nucleus | 17.0 | 68.14 |
| KRG92523 | Soybean | nucleus | 31.35 | 47.02 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 15.45 | 43.48 |
| KRH34272 | Soybean | nucleus | 32.23 | 43.45 |
| CDY08392 | Canola | nucleus | 32.23 | 43.2 |
| Solyc03g082840.2.1 | Tomato | nucleus | 24.5 | 43.02 |
| PGSC0003DMT400047705 | Potato | nucleus | 24.28 | 42.15 |
| GSMUA_Achr11P... | Banana | nucleus | 25.83 | 39.8 |
| VIT_15s0046g00150.t01 | Wine grape | nucleus | 25.83 | 37.03 |
| CDX86775 | Canola | nucleus | 24.28 | 35.37 |
| CDY27314 | Canola | nucleus | 27.81 | 35.0 |
| CDX71704 | Canola | nucleus | 25.83 | 34.93 |
| CDY61727 | Canola | nucleus | 28.48 | 34.49 |
| CDX80030 | Canola | nucleus | 27.59 | 34.34 |
| CDY41539 | Canola | nucleus | 27.59 | 34.15 |
| CDX95706 | Canola | nucleus | 27.59 | 33.88 |
| CDY64622 | Canola | nucleus | 24.06 | 33.75 |
| CDX83357 | Canola | nucleus | 27.59 | 33.42 |
| CDY51722 | Canola | nucleus | 20.09 | 32.73 |
| CDY57876 | Canola | nucleus | 26.05 | 32.69 |
| CDX89134 | Canola | extracellular, vacuole | 24.94 | 32.47 |
| CDY07156 | Canola | nucleus | 19.87 | 32.26 |
| CDY07781 | Canola | nucleus | 14.35 | 30.37 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 16.56 | 29.18 |
| CDX87189 | Canola | nucleus | 15.23 | 27.6 |
| CDY08775 | Canola | nucleus | 11.92 | 27.55 |
| CDY29082 | Canola | nucleus | 14.35 | 27.08 |
| CDY53379 | Canola | nucleus | 13.02 | 26.94 |
| CDY04620 | Canola | nucleus | 14.79 | 26.38 |
| CDX90602 | Canola | nucleus | 13.91 | 26.14 |
| CDY50231 | Canola | nucleus | 14.57 | 26.09 |
| CDY16836 | Canola | nucleus | 15.23 | 25.84 |
| CDX78095 | Canola | nucleus | 13.69 | 25.62 |
| CDY59600 | Canola | nucleus | 13.69 | 25.41 |
| CDX80191 | Canola | nucleus | 14.35 | 25.29 |
| CDX79743 | Canola | nucleus | 16.34 | 25.26 |
| CDY02191 | Canola | nucleus | 16.34 | 25.17 |
| CDY40813 | Canola | nucleus | 15.67 | 25.09 |
| CDY00373 | Canola | nucleus | 14.35 | 25.0 |
| CDY61064 | Canola | nucleus | 14.35 | 24.9 |
| CDX71050 | Canola | nucleus | 13.91 | 24.9 |
| CDY31568 | Canola | nucleus | 14.13 | 24.81 |
| CDY00341 | Canola | nucleus | 20.09 | 24.73 |
| CDY16754 | Canola | nucleus | 18.54 | 24.71 |
| CDX87270 | Canola | nucleus | 18.54 | 24.63 |
| CDY42836 | Canola | nucleus | 15.45 | 24.48 |
| CDY65260 | Canola | nucleus | 16.56 | 24.27 |
| CDY09221 | Canola | nucleus | 13.69 | 24.03 |
| CDX84369 | Canola | nucleus | 19.65 | 23.99 |
| CDX93365 | Canola | nucleus | 16.34 | 23.95 |
| CDX73385 | Canola | nucleus | 15.89 | 23.84 |
| CDX77184 | Canola | nucleus | 13.47 | 23.83 |
| CDX74947 | Canola | nucleus | 17.0 | 23.69 |
| CDY69145 | Canola | nucleus, plastid | 16.11 | 23.17 |
| CDX91370 | Canola | nucleus | 16.56 | 23.08 |
| CDX88742 | Canola | nucleus | 13.91 | 22.74 |
| CDY15624 | Canola | nucleus | 16.11 | 21.86 |
| CDX77212 | Canola | nucleus | 16.34 | 21.76 |
| CDX95139 | Canola | nucleus | 16.11 | 21.73 |
| CDY33948 | Canola | nucleus | 14.35 | 21.52 |
| CDY31735 | Canola | nucleus | 16.34 | 21.51 |
| CDY37834 | Canola | nucleus | 14.35 | 21.38 |
| CDY70838 | Canola | nucleus | 14.13 | 20.91 |
| CDY70312 | Canola | nucleus | 13.02 | 20.77 |
| CDY40358 | Canola | nucleus | 15.01 | 20.42 |
| CDY40213 | Canola | nucleus | 15.89 | 20.28 |
| CDX81292 | Canola | nucleus | 12.58 | 20.21 |
| CDY70704 | Canola | nucleus | 15.89 | 19.73 |
| CDX76102 | Canola | nucleus | 16.56 | 19.68 |
| CDY61965 | Canola | nucleus | 13.47 | 19.61 |
| CDY06274 | Canola | nucleus | 13.47 | 19.43 |
| CDY35729 | Canola | nucleus | 12.8 | 19.4 |
| CDY70666 | Canola | nucleus | 12.58 | 19.19 |
| CDY72049 | Canola | nucleus | 12.58 | 19.19 |
| CDY55422 | Canola | nucleus | 16.78 | 18.95 |
| CDX90142 | Canola | nucleus | 13.02 | 18.67 |
| CDY55549 | Canola | nucleus | 16.56 | 18.66 |
| CDX80822 | Canola | nucleus | 16.56 | 18.47 |
| CDY04855 | Canola | nucleus | 16.34 | 18.23 |
| CDY66590 | Canola | nucleus | 12.58 | 17.43 |
| CDY15678 | Canola | nucleus | 12.36 | 17.13 |
| CDY08776 | Canola | nucleus | 1.55 | 8.14 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078GJL8 | UniProt:A0A078GJL8 | EnsemblPlants:CDY24798 | ProteinID:CDY24798 | ProteinID:CDY24798.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00027253001 | InterPro:IPR003851 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF42 |
| TMHMM:TMhelix | UniParc:UPI0004EE2451 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
BnaA08g15120DBnaA08g15120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJL8]
Coordinates
chrLK032164:-:229181..230603
Molecular Weight (calculated)
50332.7 Da
IEP (calculated)
7.616
GRAVY (calculated)
-0.505
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIKVFVYFE YDKDSHSECF SSFIIQFSLS LSLSLPPTTP TLSHSTTPHI CYLFYILNIR FFSLYPLSVC FFLFMFLVKA FLKFPNHLYL DEKLFILVGR
101: VDFCDFDDQE IVVKPLEEIV TNTCPTQQAS QPQPPPSVGA AGVAERKTRP EKDQAINCPR CNSVNTKFCY YNNYSLTQPR FFCKGCRRYW TEGGSLRNIP
201: VGGGSRKNKR SHSSSISSSS DISKNHSDST QPATKKHHSD HHPHHHLMSI SQQGLTGQNP KTFETTQQDL NLGFPPHGLI RTNFTNLIHN TGNNNTSTNN
301: PFLGSSCSAT SALATSPLDL IRNNNCNNRN TSNSSFMGFP VHNQGPTSEG FSMQDHYKPS NSNTTLLGFS LDHHHDNSEF HGGFQGGEGR EVGDDVNGRH
401: LFPFEDLKLP VSSSSSATIN IDVNDHQKRA SGGDAAATSG GYWTGMLSGG SWC
101: VDFCDFDDQE IVVKPLEEIV TNTCPTQQAS QPQPPPSVGA AGVAERKTRP EKDQAINCPR CNSVNTKFCY YNNYSLTQPR FFCKGCRRYW TEGGSLRNIP
201: VGGGSRKNKR SHSSSISSSS DISKNHSDST QPATKKHHSD HHPHHHLMSI SQQGLTGQNP KTFETTQQDL NLGFPPHGLI RTNFTNLIHN TGNNNTSTNN
301: PFLGSSCSAT SALATSPLDL IRNNNCNNRN TSNSSFMGFP VHNQGPTSEG FSMQDHYKPS NSNTTLLGFS LDHHHDNSEF HGGFQGGEGR EVGDDVNGRH
401: LFPFEDLKLP VSSSSSATIN IDVNDHQKRA SGGDAAATSG GYWTGMLSGG SWC
001: MDTAKWPQEF VVKPMNEIVT NTCLKQQSNP PSPATPVERK ARPEKDQALN CPRCNSLNTK FCYYNNYSLT QPRYFCKDCR RYWTAGGSLR NIPVGGGVRK
101: NKRSSSNSSS SSPSSSSSSK KPLFANNNTP TPPLPHLNPK IGEAAATKVQ DLTFSQGFGN AHEVKDLNLA FSQGFGIGHN HHSSIPEFLQ VVPSSSMKNN
201: PLVSTSSSLE LLGISSSSAS SNSRPAFMSY PNVHDSSVYT ASGFGLSYPQ FQEFMRPALG FSLDGGDPLR QEEGSSGTNN GRPLLPFESL LKLPVSSSST
301: NSGGNGNLKE NNDEHSDHEH EKEEGEADQS VGFWSGMLSA GASAAASGGS WQ
101: NKRSSSNSSS SSPSSSSSSK KPLFANNNTP TPPLPHLNPK IGEAAATKVQ DLTFSQGFGN AHEVKDLNLA FSQGFGIGHN HHSSIPEFLQ VVPSSSMKNN
201: PLVSTSSSLE LLGISSSSAS SNSRPAFMSY PNVHDSSVYT ASGFGLSYPQ FQEFMRPALG FSLDGGDPLR QEEGSSGTNN GRPLLPFESL LKLPVSSSST
301: NSGGNGNLKE NNDEHSDHEH EKEEGEADQS VGFWSGMLSA GASAAASGGS WQ
Arabidopsis Description
DOF1.8Dof zinc finger protein DOF1.8 [Source:UniProtKB/Swiss-Prot;Acc:Q84JQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.