Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012804.1-P | Field mustard | nucleus | 97.92 | 97.51 |
| CDX90602 | Canola | nucleus | 97.92 | 97.51 |
| CDX78095 | Canola | nucleus | 82.5 | 81.82 |
| CDY59600 | Canola | nucleus | 81.67 | 80.33 |
| AT3G52440.2 | Thale cress | nucleus | 83.33 | 75.19 |
| CDY70840 | Canola | nucleus | 22.92 | 48.67 |
| KRG96269 | Soybean | nucleus | 32.08 | 44.77 |
| KRG96256 | Soybean | nucleus | 38.75 | 34.32 |
| VIT_08s0105g00170.t01 | Wine grape | nucleus | 38.33 | 34.07 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 32.08 | 29.73 |
| PGSC0003DMT400055052 | Potato | nucleus | 38.33 | 29.39 |
| CDY00373 | Canola | nucleus | 30.83 | 28.46 |
| CDY61064 | Canola | nucleus | 30.83 | 28.35 |
| CDY53379 | Canola | nucleus | 25.42 | 27.85 |
| CDY07781 | Canola | nucleus | 24.58 | 27.57 |
| CDY50231 | Canola | nucleus | 28.75 | 27.27 |
| CDY04620 | Canola | nucleus | 28.75 | 27.17 |
| CDY08775 | Canola | nucleus | 22.08 | 27.04 |
| CDX77184 | Canola | nucleus | 25.42 | 23.83 |
| CDX80191 | Canola | nucleus | 25.0 | 23.35 |
| CDY07156 | Canola | nucleus | 27.08 | 23.3 |
| CDY31568 | Canola | nucleus | 25.0 | 23.26 |
| CDY09221 | Canola | nucleus | 25.0 | 23.26 |
| CDY51722 | Canola | nucleus | 26.67 | 23.02 |
| CDX71050 | Canola | nucleus | 24.17 | 22.92 |
| CDX87189 | Canola | nucleus | 22.5 | 21.6 |
| CDX86775 | Canola | nucleus | 27.5 | 21.22 |
| CDY64622 | Canola | nucleus | 28.33 | 21.05 |
| CDX88742 | Canola | nucleus | 24.17 | 20.94 |
| CDX79743 | Canola | nucleus | 25.42 | 20.82 |
| CDX71704 | Canola | nucleus | 28.75 | 20.6 |
| CDY72657 | Canola | nucleus | 25.0 | 20.55 |
| CDY16836 | Canola | nucleus | 22.5 | 20.22 |
| CDX93365 | Canola | nucleus | 25.83 | 20.06 |
| CDY65260 | Canola | nucleus | 25.83 | 20.06 |
| CDX95706 | Canola | nucleus | 30.83 | 20.05 |
| CDX74947 | Canola | nucleus | 27.08 | 20.0 |
| CDX91370 | Canola | nucleus | 27.08 | 20.0 |
| CDY41539 | Canola | nucleus | 30.42 | 19.95 |
| CDX89134 | Canola | extracellular, vacuole | 28.75 | 19.83 |
| CDX83357 | Canola | nucleus | 30.83 | 19.79 |
| CDX80030 | Canola | nucleus | 30.0 | 19.78 |
| CDY35454 | Canola | nucleus | 27.92 | 19.59 |
| CDX73385 | Canola | nucleus | 24.58 | 19.54 |
| CDY27314 | Canola | nucleus | 29.17 | 19.44 |
| CDY02191 | Canola | nucleus | 23.75 | 19.39 |
| CDY61727 | Canola | nucleus | 30.0 | 19.25 |
| CDY33948 | Canola | nucleus | 24.17 | 19.21 |
| CDY57876 | Canola | nucleus | 28.75 | 19.11 |
| CDY71684 | Canola | nucleus | 26.67 | 19.1 |
| CDY37834 | Canola | nucleus | 24.17 | 19.08 |
| CDY70838 | Canola | nucleus | 24.17 | 18.95 |
| CDY08392 | Canola | nucleus | 26.67 | 18.93 |
| CDY03494 | Canola | nucleus | 27.08 | 18.9 |
| CDY69145 | Canola | nucleus, plastid | 24.58 | 18.73 |
| CDY40813 | Canola | nucleus | 22.08 | 18.73 |
| CDX92613 | Canola | nucleus | 26.67 | 18.66 |
| CDY71763 | Canola | nucleus | 26.67 | 18.66 |
| CDY42836 | Canola | nucleus | 22.08 | 18.53 |
| CDY40358 | Canola | nucleus | 25.0 | 18.02 |
| CDY15624 | Canola | nucleus | 25.0 | 17.96 |
| CDY70704 | Canola | nucleus | 26.67 | 17.53 |
| CDY35729 | Canola | nucleus | 21.67 | 17.39 |
| CDY16754 | Canola | nucleus | 24.58 | 17.35 |
| CDX95139 | Canola | nucleus | 24.17 | 17.26 |
| CDY70312 | Canola | nucleus | 20.42 | 17.25 |
| CDY72049 | Canola | nucleus | 21.25 | 17.17 |
| CDY70666 | Canola | nucleus | 21.25 | 17.17 |
| CDX81292 | Canola | nucleus | 20.0 | 17.02 |
| CDX87270 | Canola | nucleus | 24.17 | 17.01 |
| CDY40213 | Canola | nucleus | 25.0 | 16.9 |
| CDX90142 | Canola | nucleus | 22.08 | 16.77 |
| CDX77212 | Canola | nucleus | 23.33 | 16.47 |
| CDY31735 | Canola | nucleus | 23.33 | 16.28 |
| CDY55549 | Canola | nucleus | 27.08 | 16.17 |
| CDY00341 | Canola | nucleus | 24.58 | 16.03 |
| CDX76102 | Canola | nucleus | 25.42 | 16.01 |
| CDX80822 | Canola | nucleus | 27.08 | 16.01 |
| CDX84369 | Canola | nucleus | 24.58 | 15.9 |
| CDY61965 | Canola | nucleus | 20.42 | 15.76 |
| CDY55422 | Canola | nucleus | 26.25 | 15.71 |
| CDY06274 | Canola | nucleus | 20.42 | 15.61 |
| CDY15678 | Canola | nucleus | 20.83 | 15.29 |
| CDY66590 | Canola | nucleus | 20.83 | 15.29 |
| CDY04855 | Canola | nucleus | 25.83 | 15.27 |
| CDY24798 | Canola | nucleus | 27.08 | 14.35 |
| CDY08776 | Canola | nucleus | 1.25 | 3.49 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078GVE1 | UniProt:A0A078GVE1 | EnsemblPlants:CDY29082 | ProteinID:CDY29082 | ProteinID:CDY29082.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00041830001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF73 | UniParc:UPI0004EC577B | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g32880DBnaC07g32880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVE1]
Coordinates
chrLK032229:+:480326..481048
Molecular Weight (calculated)
26123.9 Da
IEP (calculated)
4.896
GRAVY (calculated)
-0.549
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MERTEALTSS FIWRPNANAN ANAEITPSCP RCGSSNTKFC YYNNYSLTQP RYFCKGCRRY WTKGGSLRNV PVGGGCRKSR RTKSSSSNAK TGVTASSCNS
101: GGGSPNIDLA LVYANFLNPK PDEPTLQATC DLATGASMEP SNWSMDIGDD HHYDHQVEHI IEECGYNGLP PFPGEELLSI DTNSVWSDAL LIGHNNHIEV
201: GGVTSAETVH EPVVNFADES NDSTNFLFGS WSPFDFSTDG
101: GGGSPNIDLA LVYANFLNPK PDEPTLQATC DLATGASMEP SNWSMDIGDD HHYDHQVEHI IEECGYNGLP PFPGEELLSI DTNSVWSDAL LIGHNNHIEV
201: GGVTSAETVH EPVVNFADES NDSTNFLFGS WSPFDFSTDG
001: MHAYIIHSYS DRLKKSERDM ERAEALTSSF IWRPNANANA EITPSCPRCG SSNTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKSRRPK
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.