Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P19530_001 | Banana | nucleus | 49.42 | 51.82 |
| KRG96269 | Soybean | nucleus | 28.57 | 43.02 |
| Bra012804.1-P | Field mustard | nucleus | 30.12 | 32.37 |
| CDX90602 | Canola | nucleus | 30.12 | 32.37 |
| VIT_08s0105g00170.t01 | Wine grape | nucleus | 33.59 | 32.22 |
| CDY29082 | Canola | nucleus | 29.73 | 32.08 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 19.69 | 31.68 |
| KRG96256 | Soybean | nucleus | 32.82 | 31.37 |
| Bra006923.1-P | Field mustard | nucleus | 28.96 | 30.99 |
| CDX78095 | Canola | nucleus | 28.96 | 30.99 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 21.24 | 30.39 |
| CDY59600 | Canola | nucleus | 28.57 | 30.33 |
| AT3G52440.2 | Thale cress | nucleus | 30.89 | 30.08 |
| KRH72174 | Soybean | nucleus | 33.2 | 29.45 |
| PGSC0003DMT400055052 | Potato | nucleus | 32.82 | 27.16 |
| KRH32857 | Soybean | extracellular, vacuole | 33.59 | 25.89 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 18.92 | 25.13 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 21.62 | 25.0 |
| GSMUA_Achr11P... | Banana | nucleus | 25.87 | 24.63 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 27.41 | 23.83 |
| GSMUA_Achr10P... | Banana | nucleus | 23.55 | 23.64 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 26.64 | 23.63 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 22.78 | 23.6 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 25.48 | 23.57 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 22.39 | 23.48 |
| GSMUA_Achr10P... | Banana | nucleus | 26.25 | 23.45 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 20.08 | 23.42 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 21.24 | 23.21 |
| GSMUA_Achr11P... | Banana | nucleus | 25.87 | 22.79 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 23.94 | 22.63 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 22.39 | 22.57 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 23.17 | 22.56 |
| GSMUA_Achr10P... | Banana | nucleus | 23.17 | 22.06 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 22.78 | 21.69 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 18.15 | 21.66 |
| GSMUA_Achr11P... | Banana | nucleus | 22.01 | 21.51 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 22.78 | 21.45 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 22.78 | 21.3 |
| GSMUA_Achr11P... | Banana | nucleus | 24.32 | 21.28 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 22.01 | 21.11 |
| GSMUA_Achr10P... | Banana | nucleus | 23.17 | 21.05 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 22.78 | 20.92 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 26.25 | 20.48 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 22.78 | 20.27 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 20.08 | 20.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.24 | 19.71 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 25.48 | 19.41 |
| GSMUA_Achr10P... | Banana | nucleus | 24.71 | 18.99 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 20.85 | 18.95 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 22.01 | 18.63 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 23.17 | 18.18 |
| GSMUA_Achr11P... | Banana | nucleus | 24.71 | 17.83 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 22.01 | 17.48 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 22.01 | 17.17 |
| GSMUA_Achr10P... | Banana | nucleus | 19.3 | 17.12 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 23.94 | 17.03 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 23.55 | 16.85 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 22.78 | 16.62 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 27.41 | 16.44 |
| GSMUA_Achr10P... | Banana | nucleus | 21.62 | 16.09 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 18.53 | 15.89 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 20.46 | 15.45 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 18.15 | 15.31 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 18.53 | 15.14 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr5G01010_001 | EnsemblPlants:GSMUA_Achr5P01010_001 | EnsemblPlants:GSMUA_Achr5T01010_001 |
| InterPro:IPR003851 | UniProt:M0SUN0 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF73 | UniParc:UPI0002961113 | InterPro:Znf_Dof | SEG:seg | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G01010_001]
Coordinates
chr5:-:589759..590637
Molecular Weight (calculated)
28760.2 Da
IEP (calculated)
4.688
GRAVY (calculated)
-0.657
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSNDNVLS YAPPVVADRR WKPIVELAPN CPRCHSSNTK FCYYNNYSLS QPRYFCKGCR RYWTKGGSLR NVPVGGGCRK SRRAKSTKPD SCMTRAATID
101: DSTAPADGSS IDLQALYAKY SNQRPQTEIG PATAESQLEE GDHEPVGSVG TSSESSSCNQ VFSQPMEEEE EEEAIALLRQ VDPPYNIEHS RLPLDLTGPV
201: EWPMQPVTNY VSLDCPSGSG LNYEEFESVA VGGMHHQQSP LTDDWSLLDY SSFDAFYRC
101: DSTAPADGSS IDLQALYAKY SNQRPQTEIG PATAESQLEE GDHEPVGSVG TSSESSSCNQ VFSQPMEEEE EEEAIALLRQ VDPPYNIEHS RLPLDLTGPV
201: EWPMQPVTNY VSLDCPSGSG LNYEEFESVA VGGMHHQQSP LTDDWSLLDY SSFDAFYRC
001: MHAYIIHSYS DRLKKSERDM ERAEALTSSF IWRPNANANA EITPSCPRCG SSNTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKSRRPK
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.