Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P34180_001 | Banana | nucleus | 59.93 | 50.9 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 31.91 | 49.72 |
| GSMUA_Achr10P... | Banana | nucleus | 50.35 | 48.97 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 53.19 | 44.12 |
| GSMUA_Achr10P... | Banana | nucleus | 51.42 | 43.03 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 37.59 | 42.91 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 41.49 | 42.24 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 32.98 | 41.89 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 48.58 | 41.52 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 47.87 | 40.66 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 21.28 | 37.27 |
| GSMUA_Achr11P... | Banana | nucleus | 46.45 | 36.49 |
| PGSC0003DMT400078164 | Potato | nucleus | 39.72 | 35.0 |
| Solyc06g076030.2.1 | Tomato | nucleus | 39.72 | 33.53 |
| GSMUA_Achr11P... | Banana | nucleus | 24.82 | 26.42 |
| GSMUA_Achr11P... | Banana | nucleus | 27.3 | 26.19 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 27.66 | 26.17 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 18.09 | 26.15 |
| GSMUA_Achr10P... | Banana | nucleus | 25.18 | 26.1 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 23.05 | 26.0 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 20.57 | 25.89 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 24.47 | 25.56 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 21.28 | 25.32 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 23.05 | 25.29 |
| GSMUA_Achr10P... | Banana | nucleus | 23.05 | 25.19 |
| GSMUA_Achr10P... | Banana | nucleus | 24.82 | 24.56 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 22.34 | 24.51 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 24.11 | 24.29 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 22.34 | 23.68 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 22.7 | 23.53 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 22.7 | 23.36 |
| GSMUA_Achr11P... | Banana | nucleus | 24.11 | 22.97 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 23.05 | 22.81 |
| GSMUA_Achr11P... | Banana | nucleus | 21.99 | 22.79 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 20.92 | 22.78 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.34 | 22.58 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 19.5 | 22.27 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 28.72 | 22.25 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 17.02 | 22.12 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 28.37 | 22.1 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 22.7 | 21.92 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 21.28 | 21.82 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 22.34 | 21.65 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 24.82 | 21.47 |
| GSMUA_Achr10P... | Banana | nucleus | 26.24 | 21.26 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 22.34 | 20.59 |
| GSMUA_Achr10P... | Banana | nucleus | 20.92 | 20.21 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 21.63 | 19.87 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 21.99 | 19.56 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 22.7 | 18.66 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 23.4 | 18.59 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 19.5 | 18.21 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 23.76 | 15.51 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr8G02600_001 | EnsemblPlants:GSMUA_Achr8P02600_001 | EnsemblPlants:GSMUA_Achr8T02600_001 |
| InterPro:IPR003851 | UniProt:M0TM12 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI000296E6D6 | InterPro:Znf_Dof | SEG:seg | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr8G02600_001]
Coordinates
chr8:-:1856268..1857252
Molecular Weight (calculated)
30041.1 Da
IEP (calculated)
9.823
GRAVY (calculated)
-0.574
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSVPTYL DPPERNQVCF LAAAGGGSEA SQLFPRLEAQ GTEAGVAAAG SARPISMAER ALLAKIPHPE QPHKCPRCDS SDTKFCYFNN YSLSQPRHFC
101: KTCRRYWTRG GALRNVPVGG ACRRNKRNKS SGSSSKSTAT TSTADRRAGT SSSSSTAAGG GNAERPFFSA MHTLVDPAGY QVGRSSLGVG LERWRKPQIQ
201: QFPFLGGLEP RPEPPAYRLN GEGVVSAKIE DNSHGLRLPR QCSDLLGTEQ YWSGGGGEGG STNSGGWATQ LSVFSSSTKN IS
101: KTCRRYWTRG GALRNVPVGG ACRRNKRNKS SGSSSKSTAT TSTADRRAGT SSSSSTAAGG GNAERPFFSA MHTLVDPAGY QVGRSSLGVG LERWRKPQIQ
201: QFPFLGGLEP RPEPPAYRLN GEGVVSAKIE DNSHGLRLPR QCSDLLGTEQ YWSGGGGEGG STNSGGWATQ LSVFSSSTKN IS
001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.