Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P02840_001 | Banana | nucleus | 61.83 | 63.84 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 59.94 | 62.91 |
| GSMUA_Achr10P... | Banana | nucleus | 54.89 | 59.59 |
| Solyc02g090310.1.1 | Tomato | nucleus | 36.28 | 44.23 |
| PGSC0003DMT400025984 | Potato | nucleus | 36.91 | 41.79 |
| KRH76935 | Soybean | nucleus | 43.85 | 41.37 |
| KRH28526 | Soybean | nucleus | 42.59 | 39.82 |
| VIT_00s0253g00060.t01 | Wine grape | nucleus | 43.85 | 39.49 |
| KRH04709 | Soybean | nucleus | 41.96 | 37.78 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 20.5 | 33.33 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 15.46 | 30.43 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 21.77 | 29.11 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 16.4 | 28.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.24 | 28.67 |
| CDY08775 | Canola | nucleus | 16.09 | 26.02 |
| Os03t0764900-01 | Rice | nucleus | 28.08 | 24.79 |
| Zm00001d034163_P001 | Maize | nucleus | 27.76 | 24.38 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 17.03 | 24.11 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 16.72 | 23.87 |
| KXG37485 | Sorghum | nucleus | 28.39 | 23.68 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 18.3 | 23.48 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 18.3 | 23.2 |
| TraesCS5D01G412000.1 | Wheat | nucleus | 27.76 | 23.16 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 20.19 | 23.1 |
| TraesCS5A01G401800.1 | Wheat | nucleus | 27.76 | 23.1 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 15.77 | 23.04 |
| TraesCS5B01G406500.1 | Wheat | nucleus | 27.76 | 23.04 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 18.3 | 22.57 |
| HORVU5Hr1G097620.1 | Barley | nucleus | 27.44 | 22.54 |
| CDY70312 | Canola | nucleus | 20.19 | 22.54 |
| Zm00001d013200_P001 | Maize | nucleus, plastid | 26.18 | 22.49 |
| HORVU5Hr1G097600.1 | Barley | nucleus, plastid | 16.4 | 22.41 |
| Bra037822.1-P | Field mustard | nucleus | 19.87 | 22.18 |
| GSMUA_Achr10P... | Banana | nucleus | 17.98 | 22.09 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 18.93 | 22.06 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 19.56 | 21.99 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 18.3 | 21.8 |
| GSMUA_Achr11P... | Banana | nucleus | 17.98 | 21.51 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 18.3 | 21.48 |
| GSMUA_Achr11P... | Banana | nucleus | 19.87 | 21.43 |
| GSMUA_Achr10P... | Banana | nucleus | 19.56 | 21.38 |
| CDX81292 | Canola | nucleus | 18.93 | 21.28 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 18.3 | 21.09 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 18.61 | 21.07 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 18.93 | 21.05 |
| GSMUA_Achr11P... | Banana | nucleus | 17.98 | 20.96 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 19.56 | 20.81 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 16.09 | 20.65 |
| CDY70838 | Canola | nucleus | 19.87 | 20.59 |
| GSMUA_Achr10P... | Banana | nucleus | 17.67 | 20.59 |
| CDY33948 | Canola | nucleus | 19.56 | 20.53 |
| Bra031853.1-P | Field mustard | nucleus | 19.56 | 20.39 |
| AT5G65590.1 | Thale cress | nucleus | 20.19 | 20.25 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 16.4 | 20.23 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 18.61 | 20.21 |
| CDY37834 | Canola | nucleus | 19.24 | 20.07 |
| GSMUA_Achr10P... | Banana | nucleus | 17.98 | 20.0 |
| Bra024399.1-P | Field mustard | nucleus | 19.24 | 19.93 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 22.4 | 19.51 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 20.19 | 19.39 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 22.08 | 19.34 |
| GSMUA_Achr10P... | Banana | nucleus | 20.5 | 19.29 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 18.61 | 19.28 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 17.67 | 19.24 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 16.4 | 18.98 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 19.87 | 18.98 |
| GSMUA_Achr10P... | Banana | nucleus | 20.82 | 18.97 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 19.56 | 18.67 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 15.14 | 18.53 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 19.87 | 18.53 |
| GSMUA_Achr11P... | Banana | nucleus | 20.82 | 18.38 |
| GSMUA_Achr11P... | Banana | nucleus | 17.03 | 18.24 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 18.3 | 17.79 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 19.24 | 17.78 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 18.93 | 16.9 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 20.5 | 15.05 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G26560_001 | EnsemblPlants:GSMUA_Achr9P26560_001 | EnsemblPlants:GSMUA_Achr9T26560_001 |
| InterPro:IPR003851 | UniProt:M0U3R3 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF70 | UniParc:UPI00029518EA | InterPro:Znf_Dof | SEG:seg | : |
Description
dof zinc finger domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G26560_001]
Coordinates
chr9:+:30941301..30942395
Molecular Weight (calculated)
33941.9 Da
IEP (calculated)
8.202
GRAVY (calculated)
-0.445
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQGLLGGVV DERKISHPGG LLIDPTSSSS PTSSISSQSQ SSSSPSLLAG TAEQQPQQNL RCPRCDSTNT KFCYYNNYNL TQPRHFCKTC RRYWTKGGAL
101: RNVPIGGGCR KTKAVPVIAA AGVCGKLGIA KAKPSSPDVL LRSGLAGGLE NELSTMLGSH MVAEAGGTLN TAHSLSLDPL GQLGLSASLW RNNDYSYQQQ
201: QQQQQPQPQP QPRLTQPPPQ NNNTLLGDIP SSEIQELYQK FKSSANYYNE QLQTVINNVG SFDSSCSSAT SMMTTAGVVT TAATPILEPI PHSVGEFGYW
301: NPTLAWSDLP TPNGAFH
101: RNVPIGGGCR KTKAVPVIAA AGVCGKLGIA KAKPSSPDVL LRSGLAGGLE NELSTMLGSH MVAEAGGTLN TAHSLSLDPL GQLGLSASLW RNNDYSYQQQ
201: QQQQQPQPQP QPRLTQPPPQ NNNTLLGDIP SSEIQELYQK FKSSANYYNE QLQTVINNVG SFDSSCSSAT SMMTTAGVVT TAATPILEPI PHSVGEFGYW
301: NPTLAWSDLP TPNGAFH
001: MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
Arabidopsis Description
DOF5.7SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.