Factsheet for GSMUA_Achr10P03030_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	58.82	60.38
GSMUA_Achr10P...	Banana	nucleus	60.29	57.54
GSMUA_Achr11P...	Banana	nucleus	58.46	53.72
GSMUA_Achr4P30470_001	Banana	nucleus	23.9	40.37
GSMUA_Achr7P15150_001	Banana	nucleus	21.32	32.04
GSMUA_Achr3P13830_001	Banana	nucleus	30.51	30.51
KRH24943	Soybean	nucleus	33.09	29.51
VIT_06s0004g03420.t01	Wine grape	nucleus	31.99	29.39
KRG89059	Soybean	nucleus	33.09	29.03
GSMUA_Achr3P18260_001	Banana	nucleus	23.9	29.02
GSMUA_Achr10P...	Banana	nucleus	27.21	28.68
GSMUA_Achr8P11850_001	Banana	nucleus	31.25	28.52
KRH22943	Soybean	nucleus	29.78	28.42
CDY53379	Canola	nucleus	22.79	28.31
GSMUA_Achr11P...	Banana	nucleus	30.51	28.23
GSMUA_Achr9P04290_001	Banana	nucleus	30.15	28.18
KRH10402	Soybean	nucleus	29.41	28.07
GSMUA_Achr5P19980_001	Banana	nucleus	27.21	27.82
GSMUA_Achr5P07290_001	Banana	nucleus	27.94	27.74
GSMUA_Achr8P32880_001	Banana	nucleus	25.37	27.6
GSMUA_Achr11P...	Banana	nucleus	27.57	27.57
GSMUA_Achr6P33410_001	Banana	nucleus	25.0	27.53
GSMUA_Achr1P03930_001	Banana	nucleus	25.37	26.85
GSMUA_Achr5P15160_001	Banana	nucleus	28.68	26.71
GSMUA_Achr5P23930_001	Banana	nucleus	19.12	26.67
GSMUA_Achr9P03270_001	Banana	nucleus	21.69	26.58
PGSC0003DMT400019416	Potato	nucleus	29.41	26.49
PGSC0003DMT400065271	Potato	nucleus	28.68	26.09
Solyc06g075370.2.1	Tomato	nucleus	29.04	26.07
GSMUA_Achr4P27160_001	Banana	nucleus	26.84	26.07
GSMUA_Achr2P23020_001	Banana	nucleus	26.1	25.82
Solyc11g072500.1.1	Tomato	nucleus	26.84	25.61
GSMUA_Achr8P02600_001	Banana	nucleus	26.1	25.18
GSMUA_Achr5P28660_001	Banana	nucleus	25.37	24.91
GSMUA_Achr3P10670_001	Banana	nucleus	21.69	24.89
Bra035696.1-P	Field mustard	nucleus	23.16	24.61
CDX77184	Canola	nucleus	23.16	24.61
GSMUA_Achr10P...	Banana	nucleus	26.1	24.48
GSMUA_Achr1P17670_001	Banana	nucleus	19.49	24.42
GSMUA_Achr5P01010_001	Banana	nucleus	22.06	23.17
GSMUA_Achr6P34180_001	Banana	nucleus	27.94	22.89
GSMUA_Achr9P25010_001	Banana	nucleus	25.74	22.88
PGSC0003DMT400075051	Potato	nucleus	24.26	22.68
GSMUA_Achr6P19530_001	Banana	nucleus	20.22	22.27
GSMUA_Achr1P20550_001	Banana	nucleus	22.06	22.22
GSMUA_Achr8P02150_001	Banana	nucleus	26.84	21.99
GSMUA_Achr3P29620_001	Banana	nucleus	22.79	21.75
AT2G28510.1	Thale cress	nucleus	22.79	21.53
GSMUA_Achr6P25190_001	Banana	nucleus	20.22	21.4
GSMUA_Achr11P...	Banana	nucleus	27.94	21.17
GSMUA_Achr8P15860_001	Banana	nucleus, plastid	28.31	21.15
GSMUA_AchrUn_...	Banana	nucleus	21.69	21.15
Solyc06g005130.2.1	Tomato	nucleus	23.9	21.1
GSMUA_Achr10P...	Banana	nucleus	26.1	21.07
GSMUA_Achr9P11530_001	Banana	nucleus, plastid	27.94	20.99
GSMUA_Achr5P07150_001	Banana	nucleus	25.37	20.91
GSMUA_Achr5P29110_001	Banana	nucleus	25.37	20.29
GSMUA_Achr7P27030_001	Banana	nucleus, plastid	24.26	20.25
GSMUA_Achr10P...	Banana	nucleus	25.74	20.11
GSMUA_Achr2P09970_001	Banana	nucleus	31.62	19.91
GSMUA_Achr8P02840_001	Banana	nucleus	22.43	19.87
GSMUA_Achr10P...	Banana	nucleus	20.22	18.84
GSMUA_Achr4P16590_001	Banana	nucleus	22.79	18.08
GSMUA_Achr9P26560_001	Banana	nucleus	20.59	17.67
GSMUA_Achr9P09650_001	Banana	nucleus	19.49	17.55
GSMUA_Achr5P12010_001	Banana	nucleus	21.69	16.62

Protein Annotations

MapMan:15.5.1.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G03030_001	EnsemblPlants:GSMUA_Achr10P03030_001	EnsemblPlants:GSMUA_Achr10T03030_001
InterPro:IPR003851	UniProt:M0REY0	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF69	UniParc:UPI000295BA5B	InterPro:Znf_Dof	SEG:seg	:

Description

Putative Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr10G03030_001]

Coordinates

chr10:+:10139865..10140788

Molecular Weight (calculated)

29113.9 Da

IEP (calculated)

8.203

GRAVY (calculated)

-0.630

Length

272 amino acids

Sequence
(BLAST)

001: MLIASSVQPQ AMASHGLTQQ QQDRKLTPHP EQALKCPRCA STNTKFCYYN NYSLSQPRYF CKGCRRYWTQ GGSLRNVPVG GGCRKNKRSS SSSSTSPSSK
101: KSQEQDLTST HSNPLLPTLI PPPLSYDPTD LTFSFTGLPK HPLAKQFGLE DNNHDADPMP SAPTPTNGGF LDILRTGFVD ITSPSGLSNN LYYSYGIHGG
201: LEMATGVSRE EGGLSGATAS ATTSQGSCKA MDGGDNKVRT GLPWQDGNMD ASKDCWDGFG SSLQGLINSS GL

Best Arabidopsis Sequence Match ( AT2G28510.1 )
(BLAST)

001: MDPEQEISNE TLETILVSST KGSNNNNKKM EEEMKKKVSR GELGGEAQNC PRCESPNTKF CYYNNYSLSQ PRYFCKSCRR YWTKGGTLRN VPVGGGCRRN
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV

Arabidopsis Description

DOF2.1Dof zinc finger protein DOF2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LE43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.