Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 71.93 | 69.26 |
| GSMUA_Achr10P... | Banana | nucleus | 57.54 | 60.29 |
| GSMUA_Achr11P... | Banana | nucleus | 50.53 | 54.34 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 24.21 | 42.86 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 31.93 | 33.46 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 34.74 | 33.22 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 25.96 | 33.04 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 31.23 | 31.79 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 20.0 | 31.49 |
| VIT_06s0004g03420.t01 | Wine grape | nucleus | 32.63 | 31.42 |
| KRH24943 | Soybean | nucleus | 33.33 | 31.15 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 28.77 | 30.83 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 31.23 | 30.58 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 29.12 | 30.29 |
| GSMUA_Achr11P... | Banana | nucleus | 30.88 | 29.93 |
| KRH22943 | Soybean | nucleus | 29.82 | 29.82 |
| GSMUA_Achr11P... | Banana | nucleus | 28.42 | 29.78 |
| CDY53379 | Canola | nucleus | 22.81 | 29.68 |
| KRG89059 | Soybean | nucleus | 32.28 | 29.68 |
| KRH10402 | Soybean | nucleus | 29.47 | 29.47 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 30.18 | 29.45 |
| GSMUA_Achr10P... | Banana | nucleus | 26.32 | 29.07 |
| PGSC0003DMT400019416 | Potato | nucleus | 29.82 | 28.15 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 25.26 | 28.02 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 24.21 | 27.94 |
| Solyc06g075370.2.1 | Tomato | nucleus | 29.47 | 27.72 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 18.95 | 27.69 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 24.21 | 27.6 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 26.32 | 27.27 |
| PGSC0003DMT400065271 | Potato | nucleus | 28.07 | 26.76 |
| Solyc11g072500.1.1 | Tomato | nucleus | 26.67 | 26.67 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 19.65 | 25.81 |
| Bra035696.1-P | Field mustard | nucleus | 22.81 | 25.39 |
| CDX77184 | Canola | nucleus | 22.81 | 25.39 |
| GSMUA_Achr10P... | Banana | nucleus | 25.61 | 25.17 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 20.7 | 24.89 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 24.56 | 24.82 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 18.95 | 24.32 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 22.81 | 24.07 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 23.16 | 23.83 |
| AT2G28510.1 | Thale cress | nucleus | 23.86 | 23.61 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 25.26 | 23.53 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 21.05 | 23.17 |
| PGSC0003DMT400075051 | Potato | nucleus | 23.16 | 22.68 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 26.32 | 22.59 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 28.42 | 22.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.4 | 21.86 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 27.72 | 21.82 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 25.26 | 21.82 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 19.3 | 21.4 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 24.91 | 21.39 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 25.26 | 21.18 |
| Solyc06g005130.2.1 | Tomato | nucleus | 22.81 | 21.1 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 18.25 | 21.05 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 31.58 | 20.83 |
| GSMUA_Achr10P... | Banana | nucleus | 25.26 | 20.69 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 22.11 | 20.52 |
| GSMUA_Achr11P... | Banana | nucleus | 25.61 | 20.33 |
| GSMUA_Achr10P... | Banana | nucleus | 23.51 | 19.88 |
| GSMUA_Achr10P... | Banana | nucleus | 20.35 | 19.86 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 19.65 | 19.65 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 20.0 | 17.98 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 18.95 | 17.88 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 20.35 | 17.79 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 21.05 | 17.49 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 21.75 | 17.46 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G05890_001 | EnsemblPlants:GSMUA_Achr10P05890_001 | EnsemblPlants:GSMUA_Achr10T05890_001 |
| InterPro:IPR003851 | UniProt:M0RFR6 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF69 | UniParc:UPI00029566CB | InterPro:Znf_Dof | SEG:seg | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr10G05890_001]
Coordinates
chr10:+:16383796..16384653
Molecular Weight (calculated)
30380.3 Da
IEP (calculated)
7.260
GRAVY (calculated)
-0.491
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MASHQLEGLL SCPKNQQQQE RKPRPHPEQA LKCPRCASTN TKFCYYNNYS LSQPRYFCKG CRRYWTQGGS LRNVPVGGGC RKNKRSFSSS SSRKAQDQDL
101: ITATNSFNPL PSPTFIPPLS SDLTLAFAGL HKQPPNHGHS LLLGHPNNES LPAVTTNHGF LDILRSDSID SINPSGLDNY LYYGFGVSGN VEVGGGANGE
201: DDGFLSFHGG LGGATATAAA SQGSCKDMDE GETKVLMGGD GNLAVDSGRE WTAMGSSWHG LINSSLMSGA GIDVSSTLGD AHAFF
101: ITATNSFNPL PSPTFIPPLS SDLTLAFAGL HKQPPNHGHS LLLGHPNNES LPAVTTNHGF LDILRSDSID SINPSGLDNY LYYGFGVSGN VEVGGGANGE
201: DDGFLSFHGG LGGATATAAA SQGSCKDMDE GETKVLMGGD GNLAVDSGRE WTAMGSSWHG LINSSLMSGA GIDVSSTLGD AHAFF
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.