Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 61.11 | 53.74 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 17.65 | 33.54 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 18.3 | 30.94 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 33.66 | 28.45 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 17.65 | 27.69 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 20.26 | 27.68 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 21.9 | 27.13 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 31.7 | 26.65 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 19.28 | 26.58 |
| GSMUA_Achr10P... | Banana | nucleus | 22.88 | 25.74 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 22.55 | 25.37 |
| GSMUA_Achr11P... | Banana | nucleus | 21.9 | 25.28 |
| GSMUA_Achr10P... | Banana | nucleus | 23.53 | 25.26 |
| GSMUA_Achr11P... | Banana | nucleus | 22.22 | 25.0 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 21.24 | 24.44 |
| GSMUA_Achr10P... | Banana | nucleus | 20.59 | 24.42 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 21.9 | 24.19 |
| GSMUA_Achr10P... | Banana | nucleus | 22.88 | 24.14 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 21.9 | 23.93 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 23.2 | 23.83 |
| GSMUA_Achr11P... | Banana | nucleus | 22.88 | 23.81 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 19.93 | 23.74 |
| GSMUA_Achr11P... | Banana | nucleus | 22.88 | 23.65 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 18.3 | 23.63 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 16.67 | 23.5 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 22.22 | 23.29 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 18.95 | 23.2 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 20.26 | 22.96 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 19.28 | 22.96 |
| GSMUA_Achr10P... | Banana | nucleus | 21.57 | 22.6 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 20.59 | 22.34 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 19.93 | 22.26 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 24.51 | 22.06 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 18.63 | 22.01 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 19.61 | 21.82 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 17.32 | 21.46 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 20.26 | 21.31 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 20.91 | 20.85 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 22.55 | 20.78 |
| GSMUA_Achr10P... | Banana | nucleus | 22.88 | 20.77 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 19.28 | 20.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.63 | 20.43 |
| Zm00001d006463_P001 | Maize | plastid | 22.88 | 19.94 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 19.61 | 19.87 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 21.24 | 19.7 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 21.24 | 19.58 |
| GSMUA_Achr11P... | Banana | nucleus | 22.88 | 19.5 |
| EER97271 | Sorghum | nucleus | 22.55 | 19.49 |
| Zm00001d021591_P001 | Maize | nucleus | 22.88 | 19.44 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 19.28 | 18.61 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 20.59 | 18.37 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 19.28 | 18.1 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 19.93 | 17.18 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 22.55 | 15.97 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G25010_001 | EnsemblPlants:GSMUA_Achr9P25010_001 | EnsemblPlants:GSMUA_Achr9T25010_001 |
| InterPro:IPR003851 | UniProt:M0U3A8 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF79 | UniParc:UPI0002949672 | InterPro:Znf_Dof | SEG:seg | : |
Description
Putative DOF zinc finger protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G25010_001]
Coordinates
chr9:+:29640662..29641582
Molecular Weight (calculated)
32958.1 Da
IEP (calculated)
8.555
GRAVY (calculated)
-0.375
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MIHASSTTSG AAARVMDKPS AQDQSQAVLR CPRCDSSNTK FCYYNNYSLS QPRHFCKACK RYWTRGGTLR NVPVGGGCRR NKRAKKPAAA PMAPPNHPHR
101: RPLLPPDPVP SLLVQRPSPS HLDAAALYAL QTASSSSDMS LTLPIIMNSL HIPSCTTAFD LQPHLGAPGL GLPSNPQREN EYHLGELQPL SPVDDYPLFG
201: SSLPSASQLA SSIKQLKQVA DYQAILPFDE LQASGIGGSL NAMTKEVKWE GQTNNLMNSC TDWQIPSVNS LDNFGPAAAT YWNVVIGGTG GWPDGMNYGS
301: SVTPLI
101: RPLLPPDPVP SLLVQRPSPS HLDAAALYAL QTASSSSDMS LTLPIIMNSL HIPSCTTAFD LQPHLGAPGL GLPSNPQREN EYHLGELQPL SPVDDYPLFG
201: SSLPSASQLA SSIKQLKQVA DYQAILPFDE LQASGIGGSL NAMTKEVKWE GQTNNLMNSC TDWQIPSVNS LDNFGPAAAT YWNVVIGGTG GWPDGMNYGS
301: SVTPLI
001: MQSKNMIVAS SHQQQQQQQP QQPQPQLKCP RCDSSNTKFC YYNNYSLSQP RHFCKACKRY WTRGGTLRNV PVGGSYRKNK RVKRPSTATT TTASTVSTTN
101: SSSPNNPHQI SHFSSMNHHP LFYGLSDHMS SCNNNLPMIP SRFSDSSKTC SSSGLESEFL SSGFSSLSAL GLGLPHQMSH DHTINGSFIN NSTTNKPFLL
201: SGLFGSSMSS SSTLLQHPHK PMNNGGDMLG QSHLQTLASL QDLHVGGNNE DMKYKEGKLD QISGNINGFM SSSSSLDPSN YNNMWNNASV VNGAWLDPTN
301: NNVGSSLTSL I
101: SSSPNNPHQI SHFSSMNHHP LFYGLSDHMS SCNNNLPMIP SRFSDSSKTC SSSGLESEFL SSGFSSLSAL GLGLPHQMSH DHTINGSFIN NSTTNKPFLL
201: SGLFGSSMSS SSTLLQHPHK PMNNGGDMLG QSHLQTLASL QDLHVGGNNE DMKYKEGKLD QISGNINGFM SSSSSLDPSN YNNMWNNASV VNGAWLDPTN
301: NNVGSSLTSL I
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G28310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.