Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 67.45 | 68.37 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 56.04 | 59.64 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 52.01 | 58.27 |
| GSMUA_Achr11P... | Banana | nucleus | 50.67 | 55.51 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 41.61 | 55.36 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 27.52 | 50.93 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 43.96 | 44.86 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 54.03 | 37.27 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 21.81 | 35.91 |
| GSMUA_Achr10P... | Banana | nucleus | 33.22 | 34.74 |
| GSMUA_Achr10P... | Banana | nucleus | 29.53 | 34.11 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 29.19 | 33.85 |
| GSMUA_Achr11P... | Banana | nucleus | 29.53 | 33.21 |
| GSMUA_Achr11P... | Banana | nucleus | 32.21 | 32.43 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 26.85 | 32.39 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 26.85 | 32.0 |
| GSMUA_Achr10P... | Banana | nucleus | 28.52 | 31.25 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 27.85 | 30.18 |
| GSMUA_Achr10P... | Banana | nucleus | 28.19 | 28.97 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 21.48 | 28.83 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 25.84 | 28.31 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 25.84 | 28.1 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 18.12 | 27.69 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 26.17 | 27.66 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 23.83 | 27.41 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 30.54 | 26.76 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 24.83 | 26.71 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 23.83 | 26.3 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 20.47 | 25.74 |
| GSMUA_Achr11P... | Banana | nucleus | 30.87 | 25.63 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 21.14 | 25.51 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 24.83 | 25.43 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 28.19 | 25.3 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 27.52 | 24.85 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 17.79 | 24.42 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 26.51 | 23.8 |
| GSMUA_Achr10P... | Banana | nucleus | 26.85 | 23.74 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 28.19 | 23.2 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 23.83 | 23.2 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.14 | 22.58 |
| GSMUA_Achr10P... | Banana | nucleus | 21.81 | 22.26 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 26.51 | 21.7 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 22.15 | 21.5 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 18.12 | 21.01 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 20.13 | 19.87 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 18.79 | 19.65 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 20.81 | 19.56 |
| GSMUA_Achr10P... | Banana | nucleus | 22.48 | 19.25 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 22.82 | 19.15 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 21.81 | 18.95 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 20.47 | 18.71 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr8G11850_001 | EnsemblPlants:GSMUA_Achr8P11850_001 | EnsemblPlants:GSMUA_Achr8T11850_001 |
| InterPro:IPR003851 | UniProt:M0TPN8 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF42 | UniParc:UPI000295C35B | InterPro:Znf_Dof | SEG:seg | : |
Description
Putative Dof zinc finger protein DOF4.6 [Source:GMGC_GENE;Acc:GSMUA_Achr8G11850_001]
Coordinates
chr8:-:8588747..8591935
Molecular Weight (calculated)
31608.6 Da
IEP (calculated)
7.784
GRAVY (calculated)
-0.559
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTAQWHQVR LVKPAEMVSS TATTSGSNSC TTARPQVTER RARPHKGQAL SCPRCNSTNT KFCYYNNYSL TQPRYFCKTC RRYWTEGGSL RNVPVGGGSR
101: KNKRSSVSSS STTTAAAASM ITSSTATATS AFHEGQDLNL AFPHPTLPEF NDFPGLESTT VNNNNNSSNT DNSSNPCNAV GALSAMELLS SGMTARGIGP
201: FVPMTLPEYP TGFGLQDFRA PALSFPMEGI DGGGGEGGTG GYESLQGLQE GAGGRLLFPF EDLKPGVHTS TAEFENNRSQ GGHPPGFWNG MMGGGGSW
101: KNKRSSVSSS STTTAAAASM ITSSTATATS AFHEGQDLNL AFPHPTLPEF NDFPGLESTT VNNNNNSSNT DNSSNPCNAV GALSAMELLS SGMTARGIGP
201: FVPMTLPEYP TGFGLQDFRA PALSFPMEGI DGGGGEGGTG GYESLQGLQE GAGGRLLFPF EDLKPGVHTS TAEFENNRSQ GGHPPGFWNG MMGGGGSW
001: MDTAQWPQEI VVKPLEEIVT NTCPKPQPQP LQPQQPPSVG GERKARPEKD QAVNCPRCNS TNTKFCYYNN YSLTQPRYFC KGCRRYWTEG GSLRNIPVGG
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
Arabidopsis Description
DOF4.6Dof zinc finger protein DOF4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.