Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P29620_001 | Banana | nucleus | 52.53 | 47.37 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 53.7 | 42.33 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 49.03 | 36.73 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 19.07 | 30.43 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 19.84 | 28.18 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 27.24 | 25.27 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 19.07 | 25.13 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 24.12 | 25.1 |
| HORVU2Hr1G013060.1 | Barley | nucleus, plastid | 28.79 | 24.83 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 21.4 | 24.77 |
| TraesCS2A01G079200.1 | Wheat | nucleus | 29.96 | 23.62 |
| TraesCS2D01G076600.1 | Wheat | nucleus | 29.96 | 23.48 |
| TraesCS2B01G094000.1 | Wheat | nucleus | 29.96 | 23.33 |
| Zm00001d013783_P001 | Maize | nucleus | 26.07 | 23.02 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 24.12 | 22.96 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 21.01 | 22.78 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 19.84 | 22.77 |
| Zm00001d033093_P001 | Maize | nucleus | 31.52 | 22.5 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 24.51 | 22.34 |
| EER91281 | Sorghum | nucleus | 33.07 | 22.08 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 23.35 | 22.06 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 21.4 | 22.0 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 28.4 | 21.99 |
| GSMUA_Achr11P... | Banana | nucleus | 22.57 | 21.89 |
| GSMUA_Achr10P... | Banana | nucleus | 24.51 | 21.72 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 18.29 | 21.66 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 22.18 | 21.43 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 21.4 | 21.4 |
| GSMUA_Achr10P... | Banana | nucleus | 21.01 | 20.93 |
| GSMUA_Achr11P... | Banana | nucleus | 28.79 | 20.61 |
| GSMUA_Achr10P... | Banana | nucleus | 21.4 | 20.22 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 20.23 | 20.08 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 21.4 | 20.07 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 21.79 | 20.0 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 23.74 | 19.93 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 25.68 | 19.88 |
| GSMUA_Achr11P... | Banana | nucleus | 21.01 | 19.85 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.4 | 19.71 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 21.01 | 19.64 |
| GSMUA_Achr11P... | Banana | nucleus | 22.57 | 19.59 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 22.18 | 19.59 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 23.35 | 19.54 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 22.96 | 19.54 |
| GSMUA_Achr10P... | Banana | nucleus | 21.4 | 19.3 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 21.4 | 18.84 |
| GSMUA_Achr10P... | Banana | nucleus | 21.4 | 18.84 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 24.9 | 18.82 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 24.12 | 18.79 |
| GSMUA_Achr11P... | Banana | nucleus | 21.4 | 18.71 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 17.9 | 18.62 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 26.07 | 18.51 |
| GSMUA_Achr10P... | Banana | nucleus | 24.12 | 18.4 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 22.57 | 18.3 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 21.01 | 18.12 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 25.29 | 17.86 |
| GSMUA_Achr10P... | Banana | nucleus | 24.12 | 17.82 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 21.01 | 15.21 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 23.35 | 13.89 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G25190_001 | EnsemblPlants:GSMUA_Achr6P25190_001 | EnsemblPlants:GSMUA_Achr6T25190_001 |
| InterPro:IPR003851 | UniProt:M0TA15 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF82 | UniParc:UPI0002954DDA | InterPro:Znf_Dof | SEG:seg | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_218.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr6G25190_001]
Coordinates
chr6:+:26241817..26242725
Molecular Weight (calculated)
27831.2 Da
IEP (calculated)
8.771
GRAVY (calculated)
-0.584
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGLQSSGG CKSTATVRPP EKGLKCPRCD SSNTKFCYYN NYSLSQPRHF CRTCRRYWTK GGALRNVPVG GGCRKNNKSK LQYAPAAPGV FSSNQFITFR
101: DISHSATFSS AATPAVGAYN EIGGNSSSAA NSGNIVSSVE SLSSINNDLH WKLQQQRLDM LLGGEAHKES RIYGPDQQKL NSSRVAERPT DDVCEGSGSS
201: NAYVSTWLLD SSYSMPPSTS IINSITNSST KSNCNINASY WDGIPAWSDM PQFTTMP
101: DISHSATFSS AATPAVGAYN EIGGNSSSAA NSGNIVSSVE SLSSINNDLH WKLQQQRLDM LLGGEAHKES RIYGPDQQKL NSSRVAERPT DDVCEGSGSS
201: NAYVSTWLLD SSYSMPPSTS IINSITNSST KSNCNINASY WDGIPAWSDM PQFTTMP
001: MMTSSHQSNT TGFKPRRIKT TAKPPRQINN KEPSPATQPV LKCPRCDSVN TKFCYYNNYS LSQPRHYCKN CRRYWTRGGA LRNVPIGGST RNKNKPCSLQ
101: VISSPPLFSN GTSSASRELV RNHPSTAMMM MSSGGFSGYM FPLDPNFNLA SSSIESLSSF NQDLHQKLQQ QRLVTSMFLQ DSLPVNEKTV MFQNVELIPP
201: STVTTDWVFD RFATGGGATS GNHEDNDDGE GNLGNWFHNA NNNALL
101: VISSPPLFSN GTSSASRELV RNHPSTAMMM MSSGGFSGYM FPLDPNFNLA SSSIESLSSF NQDLHQKLQQ QRLVTSMFLQ DSLPVNEKTV MFQNVELIPP
201: STVTTDWVFD RFATGGGATS GNHEDNDDGE GNLGNWFHNA NNNALL
Arabidopsis Description
DOF4.7Dof zinc finger protein-like [Source:UniProtKB/TrEMBL;Acc:Q0WQS4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.