CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033093_P001	Maize	nucleus	73.77	78.89
Zm00001d013783_P001	Maize	nucleus	56.1	74.23
TraesCS2A01G079200.1	Wheat	nucleus	55.58	65.64
HORVU2Hr1G013060.1	Barley	nucleus, plastid	49.87	64.43
TraesCS2B01G094000.1	Wheat	nucleus	54.81	63.94
TraesCS2D01G076600.1	Wheat	nucleus	53.77	63.11
EER97271	Sorghum	nucleus	30.91	33.62
GSMUA_Achr6P25190_001	Banana	nucleus	22.08	33.07
GSMUA_Achr7P27030_001	Banana	nucleus, plastid	24.68	29.14
OQU79380	Sorghum	nucleus, vacuole	24.94	28.24
GSMUA_Achr4P16590_001	Banana	nucleus	21.82	24.49
KXG30845	Sorghum	nucleus	18.44	23.36
EES05649	Sorghum	nucleus	17.4	22.71
KXG39680	Sorghum	nucleus	23.12	22.59
KXG21095	Sorghum	nucleus	21.82	21.82
KXG37254	Sorghum	nucleus	24.42	21.61
EES03938	Sorghum	nucleus	17.4	20.0
EES07840	Sorghum	nucleus	17.14	19.41
EES15496	Sorghum	nucleus	17.4	18.93
EES18302	Sorghum	plastid	17.92	18.85
KXG26925	Sorghum	nucleus	18.44	18.3
KXG37485	Sorghum	nucleus	17.4	17.63
KXG31020	Sorghum	nucleus	18.18	15.32

Protein Annotations

MapMan:15.5.1.5	EntrezGene:8064546	UniProt:C5WU64	ProteinID:DAA34008.1	EnsemblPlants:EER91281	ProteinID:EER91281
ProteinID:EER91281.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701
ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF82	EnsemblPlantsGene:SORBI_3001G179300	UniParc:UPI0001A8229D
RefSeq:XP_002464283.1	InterPro:Znf_Dof	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:15173074..15174794

Molecular Weight (calculated)

38463.8 Da

IEP (calculated)

8.132

GRAVY (calculated)

-0.173

Length

385 amino acids

Sequence
(BLAST)

001: MASATTAATG DDAVGTRKGG TGGATAGGGT APQTQQQTPP PPEQGLRCPR CDSPNTKFCY YNNYSLSQPR HFCKTCRRYW TKGGALRNVP VGGGCRKNKR
101: SRSAAAVAVA AAAAASRLSL NLPPAEAAAA DQQQAAARLG FLGAAHHHPA VASSPIGGAG APAADYHHQQ AGMMALQPRL HGPGAVVGQY VPFGDWPSSG
201: DVSSGGGCHA VNGGAAAAVS MSSSIASSIE SLSFINQDLH WKLQQQRLAT MFLGTPTTSS GAAAGAHVDG AAAAAGAAAP HVVGGTFLHM AAGPPPPHGM
301: VEATTMAPPA ATSWFMDSSC YVLPSPTTAH HANTAAAAVV ATSNCNVVNS SGGGDDDNAT SNNNNCGPGS AIPSWGDMST FAMLP

Best Arabidopsis Sequence Match ( AT5G65590.1 )
(BLAST)

001: MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP

Arabidopsis Description

DOF5.7SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.