CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038281_P001	Maize	mitochondrion, nucleus	74.32	83.18
TraesCS1B01G284300.1	Wheat	nucleus	54.92	63.61
TraesCS1A01G275000.1	Wheat	nucleus	53.55	62.03
Os05t0440000-00	Rice	nucleus	54.64	61.16
HORVU1Hr1G074140.1	Barley	nucleus, vacuole	54.64	58.14
TraesCS1D01G274700.1	Wheat	mitochondrion	55.46	53.85
EES03938	Sorghum	nucleus	46.72	51.04
GSMUA_Achr8P32880_001	Banana	nucleus	19.67	28.8
VIT_18s0001g15730.t01	Wine grape	nucleus	20.77	27.05
Bra017906.1-P	Field mustard	nucleus	18.03	26.09
CDY50231	Canola	nucleus	17.76	25.69
CDY04620	Canola	nucleus	17.76	25.59
CDY00373	Canola	nucleus	18.03	25.38
Bra012277.1-P	Field mustard	nucleus	17.49	24.52
CDY61064	Canola	nucleus	17.49	24.52
PGSC0003DMT400002060	Potato	nucleus	17.76	24.44
Solyc04g070960.1.1	Tomato	nucleus	17.76	24.34
AT1G21340.1	Thale cress	nucleus	17.21	24.23
KRH64521	Soybean	nucleus	19.13	24.22
KRH53419	Soybean	nucleus	18.85	23.88
EES05649	Sorghum	nucleus	17.76	22.03
OQU79380	Sorghum	nucleus, vacuole	19.4	20.88
KXG30845	Sorghum	nucleus	17.21	20.72
EES07840	Sorghum	nucleus	18.31	19.71
KXG26925	Sorghum	nucleus	20.77	19.59
EES15496	Sorghum	nucleus	18.31	18.93
EER91281	Sorghum	nucleus	18.85	17.92
KXG37485	Sorghum	nucleus	18.58	17.89
KXG39680	Sorghum	nucleus	19.13	17.77
KXG21095	Sorghum	nucleus	18.31	17.4
KXG31020	Sorghum	nucleus	21.04	16.85
KXG37254	Sorghum	nucleus	19.95	16.78
EER97271	Sorghum	nucleus	15.03	15.54

Protein Annotations

MapMan:15.5.1.5	EntrezGene:8072499	UniProt:C5YYR4	ProteinID:DAA34028.1	EnsemblPlants:EES18302	ProteinID:EES18302
ProteinID:EES18302.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701
ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF72	EnsemblPlantsGene:SORBI_3009G153400	UniParc:UPI0001A88865
RefSeq:XP_002439872.1	InterPro:Znf_Dof	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:50971939..50975263

Molecular Weight (calculated)

38490.2 Da

IEP (calculated)

5.985

GRAVY (calculated)

-0.210

Length

366 amino acids

Sequence
(BLAST)

001: MKLSSSSHHL LLESSNLTLS PHHRNTAVVT RMLSSHCENM LPYAPGRRAA VLLDHRRYRP NVVEVAPSCP RCDSPNTKFC YYNNYSLSQP RYFCKGCRRY
101: WTKGGSLRNV PVGGGCRKNR RGKPVVRAVA VDAAVAAASG GASALANRSS SSSPATLRPD LLLEGMIGSP VGLCQPTDDD AAEIPAVVAP EGSTIDLALL
201: YAKFLNHQPA AAAEPCAAAV VPESLDTLSG SSTSGDVSPV VVPPRDQHQP FTTQDHGGFG ELSATTASAE PSAAPPQRPA DDACACAAEA LIGALSVDPR
301: CYDSLGLPPD GGDLVLPSTW HLGTKYEPFD PLPEDAMSLQ DGFAGDEDVW SSALACQGLE AALCRP

Best Arabidopsis Sequence Match ( AT3G52440.1 )
(BLAST)

001: MERAEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKSRRP KSSSGNNTKT SLTANSGNPG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG

Arabidopsis Description

Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.