Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G284300.1 | Wheat | nucleus | 66.36 | 68.67 |
| TraesCS1A01G275000.1 | Wheat | nucleus | 65.75 | 68.04 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 65.44 | 62.21 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 59.94 | 59.94 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 66.06 | 57.29 |
| Os01t0865800-00 | Rice | nucleus | 55.05 | 54.71 |
| EES18302 | Sorghum | plastid | 61.16 | 54.64 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 22.63 | 29.6 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 22.32 | 25.98 |
| Bra017906.1-P | Field mustard | nucleus | 19.88 | 25.69 |
| CDY50231 | Canola | nucleus | 19.57 | 25.3 |
| CDY04620 | Canola | nucleus | 19.57 | 25.2 |
| CDY00373 | Canola | nucleus | 19.57 | 24.62 |
| KRH64521 | Soybean | nucleus | 21.41 | 24.22 |
| Bra012277.1-P | Field mustard | nucleus | 19.27 | 24.14 |
| CDY61064 | Canola | nucleus | 19.27 | 24.14 |
| AT1G21340.1 | Thale cress | nucleus | 18.96 | 23.85 |
| Os05t0112200-01 | Rice | nucleus | 21.1 | 23.79 |
| PGSC0003DMT400002060 | Potato | nucleus | 19.27 | 23.68 |
| Solyc04g070960.1.1 | Tomato | nucleus | 19.27 | 23.6 |
| KRH53419 | Soybean | nucleus | 20.8 | 23.53 |
| Os02t0707200-00 | Rice | nucleus | 20.49 | 23.26 |
| Os02t0726300-01 | Rice | nucleus | 19.88 | 23.05 |
| Os04t0567800-01 | Rice | nucleus | 25.38 | 22.86 |
| Os06t0284500-00 | Rice | nucleus | 17.74 | 20.07 |
| Os02t0673700-01 | Rice | nucleus | 22.94 | 19.68 |
| Os03t0764900-01 | Rice | nucleus | 20.49 | 18.66 |
| Os12t0569900-01 | Rice | nucleus | 19.27 | 18.1 |
| Os07t0236700-01 | Rice | nucleus | 18.35 | 17.0 |
| Os03t0821200-00 | Rice | nucleus | 21.41 | 16.91 |
| Os02t0252400-01 | Rice | nucleus | 18.96 | 16.62 |
| Os03t0276300-00 | Rice | cytosol | 3.06 | 7.19 |
| Os07t0508900-00 | Rice | cytosol | 0.61 | 5.0 |
| Os07t0508700-00 | Rice | cytosol | 1.53 | 4.81 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:4338919 | ProteinID:BAF17580.1 | ProteinID:BAS94232.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | EnsemblPlantsGene:Os05g0440000 | EnsemblPlants:Os05t0440000-00 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 |
| PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF72 | UniProt:Q0DHU3 | UniParc:UPI0000E124FB | RefSeq:XP_015638935.1 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
DNA BINDING WITH ONE FINGER 29Zinc finger, Dof-type family protein. (Os05t0440000-00)
Coordinates
chr5:+:21555553..21556609
Molecular Weight (calculated)
34162.0 Da
IEP (calculated)
6.337
GRAVY (calculated)
-0.324
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSHCESML AYAAAAGRRA VVVDHHQRRY RPNVEVAPNC PRCESPNTKF CYYNNYSLSQ PRYFCKGCRR YWTKGGSLRN VPVGGGCRKN RRGKAVRAMV
101: GETMTARGGG GGGAAAFSHR FHGPVRPDMI LEGMAGSTAA SAGLGEQPGV AAPDEKPAAA DGSTIDLALL YAKFLNHHQP TMAEQGGGAA VPESVDTSSG
201: SSSDRTTSPA AAQPAAAAAY GPGQDGLVGE PISTEEHGAA AMARCAQALG ELNFSVDQIS CYTSLGLPTT DGGDLILPST LDQHAKYEPF DSLPEDALSL
301: HDIISGDDDV WCNALGCQGL EAALCRP
101: GETMTARGGG GGGAAAFSHR FHGPVRPDMI LEGMAGSTAA SAGLGEQPGV AAPDEKPAAA DGSTIDLALL YAKFLNHHQP TMAEQGGGAA VPESVDTSSG
201: SSSDRTTSPA AAQPAAAAAY GPGQDGLVGE PISTEEHGAA AMARCAQALG ELNFSVDQIS CYTSLGLPTT DGGDLILPST LDQHAKYEPF DSLPEDALSL
301: HDIISGDDDV WCNALGCQGL EAALCRP
001: MHAYIIHSYS DRLKKSERDM ERAEALTSSF IWRPNANANA EITPSCPRCG SSNTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKSRRPK
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.