Factsheet for Os02t0252400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G048700.1	Barley	nucleus	39.14	43.84
TraesCS5D01G161000.1	Wheat	nucleus	38.34	41.81
TraesCS5B01G154100.1	Wheat	nucleus	37.8	41.72
TraesCS5A01G155900.1	Wheat	nucleus	37.53	41.42
Os04t0567800-01	Rice	nucleus	27.61	28.37
Os02t0673700-01	Rice	nucleus	26.54	25.98
Os02t0726300-01	Rice	nucleus	16.89	22.34
Os02t0707200-00	Rice	nucleus	16.35	21.18
Os06t0284500-00	Rice	nucleus	16.35	21.11
Os05t0112200-01	Rice	nucleus	16.09	20.69
GSMUA_Achr6P19530_001	Banana	nucleus	13.67	20.65
Os05t0440000-00	Rice	nucleus	16.62	18.96
Os01t0865800-00	Rice	nucleus	16.62	18.84
Os12t0569900-01	Rice	nucleus	16.09	17.24
Os07t0236700-01	Rice	nucleus	15.55	16.43
Os03t0764900-01	Rice	nucleus	15.28	15.88
Os03t0821200-00	Rice	nucleus	16.62	14.98
Os03t0276300-00	Rice	cytosol	2.68	7.19
Os07t0508900-00	Rice	cytosol	0.54	5.0
Os07t0508700-00	Rice	cytosol	1.07	3.85

Protein Annotations

MapMan:15.5.1.5	EntrezGene:4328903	EMBL:AB028131	ProteinID:BAD19767.1	ProteinID:BAF08365.1	ProteinID:BAS77920.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0046872	EMBL:GQ183530	InterPro:IPR003851
EnsemblPlantsGene:Os02g0252400	EnsemblPlants:Os02t0252400-01	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF74	UniProt:Q6K537	UniParc:UPI000037595C	RefSeq:XP_015623741.1	InterPro:Znf_Dof
SEG:seg	:	:	:	:	:

Description

PROLAMIN BOX BINDING FACTORDof zinc finger transcriptional activator, Dof zinc finger transcription factor, Grain filling, GA response in aleurone cell (Os02t0252400-01)

Coordinates

chr2:-:8590318..8593735

Molecular Weight (calculated)

36845.5 Da

IEP (calculated)

7.308

GRAVY (calculated)

-0.115

Length

373 amino acids

Sequence
(BLAST)

001: MASGGALSPV EEKPTVVKTT KAEQHEEEAA VAVKSAAEMM KKSSPCCPRC NSIKTKFCYY NNYSMAQPRY FCRECRRYWT QGGSLRNVPV GGGCRKSKRS
101: SASSASASAA SPPAPAVGAA PPVVPALSSA ISKLLQSEPM AAPCADFPNV LPTFVSTGFE LPAAAGDRLS LGSFGAFGNL SAAVAAPGGG GGSSTTTSFM
201: DMLRGVGGLF DGVGNSHQMG GNGGGGGSYY APLITGAGNG MLMPPPPLPP FSGSLMQHGM QGLFANHAMG GGGGGVMNAG EDGSVMAGLG GGQWPPALGG
301: ADEQQGGGDG GEAVMTKDTG GGASSSASRP DYFYGWNSAA GGVVAGGGIG GNAAAATGAT PWQGLIDSSS AMM

Best Arabidopsis Sequence Match ( AT3G52440.2 )
(BLAST)

001: MHAYIIHSYS DRLKKSERDM ERAEALTSSF IWRPNANANA EITPSCPRCG SSNTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKSRRPK
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG

Arabidopsis Description

Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.