Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0508700-00 | Rice | cytosol | 10.07 | 13.46 |
| Os03t0821200-00 | Rice | nucleus | 30.22 | 10.14 |
| Os05t0112200-01 | Rice | nucleus | 17.99 | 8.62 |
| Os07t0236700-01 | Rice | nucleus | 20.86 | 8.22 |
| HORVU2Hr1G047750.4 | Barley | plastid | 11.51 | 7.08 |
| TraesCS1B01G185700.1 | Wheat | cytosol | 8.63 | 5.53 |
| TraesCS6A01G233700.1 | Wheat | cytosol, mitochondrion, nucleus | 7.91 | 5.07 |
| Os12t0569900-01 | Rice | nucleus | 12.23 | 4.89 |
| Os02t0673700-01 | Rice | nucleus | 10.07 | 3.67 |
| Os04t0567800-01 | Rice | nucleus | 9.35 | 3.58 |
| Os06t0284500-00 | Rice | nucleus | 7.19 | 3.46 |
| Zm00001d029512_P001 | Maize | nucleus | 7.91 | 3.13 |
| Os02t0707200-00 | Rice | nucleus | 6.47 | 3.12 |
| Os05t0440000-00 | Rice | nucleus | 7.19 | 3.06 |
| PGSC0003DMT400058729 | Potato | nucleus | 4.32 | 3.05 |
| Os01t0865800-00 | Rice | nucleus | 6.47 | 2.74 |
| Os02t0252400-01 | Rice | nucleus | 7.19 | 2.68 |
| Os07t0508900-00 | Rice | cytosol | 0.72 | 2.5 |
| Os02t0726300-01 | Rice | nucleus | 5.04 | 2.48 |
| AT3G45610.1 | Thale cress | nucleus | 4.32 | 2.45 |
| KRH20417 | Soybean | nucleus | 5.04 | 2.13 |
| KRH50082 | Soybean | nucleus | 4.32 | 2.08 |
| CDX80191 | Canola | nucleus | 2.88 | 1.56 |
| AT5G60200.1 | Thale cress | nucleus | 2.88 | 1.56 |
| CDY31568 | Canola | nucleus | 2.88 | 1.55 |
| CDY09221 | Canola | nucleus | 2.88 | 1.55 |
| Bra002504.1-P | Field mustard | nucleus | 2.88 | 1.55 |
| CDX88742 | Canola | nucleus | 2.88 | 1.44 |
| Bra006675.1-P | Field mustard | nucleus | 2.88 | 1.44 |
| Bra020261.1-P | Field mustard | nucleus | 2.16 | 1.26 |
| Os03t0764900-01 | Rice | nucleus | 2.16 | 0.84 |
| CDX71050 | Canola | nucleus | 1.44 | 0.79 |
Protein Annotations
| EnsemblPlants:Os03t0276300-00 | EnsemblPlantsGene:Os03g0276300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF65 |
| SEG:seg | UniParc:UPI00039391A3 | MapMan:35.2 | : | : | : |
Description
DNA BINDING WITH ONE FINGER 14Similar to Dof domain, zinc finger family protein, expressed. (Os03t0276300-00)
Coordinates
chr3:-:9359575..9359994
Molecular Weight (calculated)
14604.0 Da
IEP (calculated)
6.073
GRAVY (calculated)
-0.541
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: AGFQPLGGMH HHVDTADQFP VASGGGATIG ASLEQWRVQQ QQQQQPQQHQ FPFLGGALEL PPPPPMYQLG LEATRAAGTG ATAAAAFTLG QTSATATTSR
101: QEGSMKLEDS KGLEMSLQRQ YMAALRQGDG VWGNNNGGN
101: QEGSMKLEDS KGLEMSLQRQ YMAALRQGDG VWGNNNGGN
001: MARRGLLISF FAIFSVLLQS STSLISSSSV FVNPSKVKQV SSKPRAFVYE GFLTELECDH MVSLAKASLK RSAVADNDSG ESKFSEVRTS SGTFISKGKD
101: PIVSGIEDKI STWTFLPKEN GEDIQVLRYE HGQKYDAHFD YFHDKVNIVR GGHRMATILM YLSNVTKGGE TVFPDAEIPS RRVLSENKED LSDCAKRGIA
201: VKPRKGDALL FFNLHPDAIP DPLSLHGGCP VIEGEKWSAT KWIHVDSFDR IVTPSGNCTD MNESCERWAV LGECTKNPEY MVGTTELPGY CRRSCKAC
101: PIVSGIEDKI STWTFLPKEN GEDIQVLRYE HGQKYDAHFD YFHDKVNIVR GGHRMATILM YLSNVTKGGE TVFPDAEIPS RRVLSENKED LSDCAKRGIA
201: VKPRKGDALL FFNLHPDAIP DPLSLHGGCP VIEGEKWSAT KWIHVDSFDR IVTPSGNCTD MNESCERWAV LGECTKNPEY MVGTTELPGY CRRSCKAC
Arabidopsis Description
P4H4Probable prolyl 4-hydroxylase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAN3]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.