Factsheet for Os03t0821200-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37254	Sorghum	nucleus	78.99	75.17
TraesCS5D01G493000.1	Wheat	nucleus	68.84	62.64
TraesCS5A01G479400.1	Wheat	nucleus	70.05	62.1
TraesCS5B01G492600.1	Wheat	nucleus	67.39	61.73
GSMUA_Achr6P33410_001	Banana	nucleus	31.64	53.04
CDY07781	Canola	nucleus	25.85	50.0
Zm00001d012963_P001	Maize	plastid, vacuole	74.88	49.36
Os07t0236700-01	Rice	nucleus	41.3	48.44
VIT_08s0007g00180.t01	Wine grape	nucleus	39.61	47.54
Bra000008.1-P	Field mustard	nucleus	29.95	42.32
Solyc10g086440.1.1	Tomato	nucleus	36.96	42.27
Bra005181.1-P	Field mustard	nucleus	32.85	41.85
CDX74947	Canola	nucleus	32.61	41.54
AT2G37590.1	Thale cress	nucleus	33.09	41.52
PGSC0003DMT400049288	Potato	nucleus	37.44	41.44
CDX93365	Canola	nucleus	30.92	41.42
Os05t0112200-01	Rice	nucleus	28.99	41.38
CDX91370	Canola	nucleus	32.37	41.23
CDY65260	Canola	nucleus	30.68	41.1
Bra017171.1-P	Field mustard	nucleus	30.43	40.78
CDX79743	Canola	nucleus	28.74	40.61
Os12t0569900-01	Rice	nucleus	31.64	37.64
Os03t0276300-00	Rice	cytosol	10.14	30.22
Os07t0508900-00	Rice	cytosol	2.66	27.5
Os02t0707200-00	Rice	nucleus	18.12	26.04
Os02t0726300-01	Rice	nucleus	17.63	25.89
Os02t0673700-01	Rice	nucleus	23.43	25.46
Os04t0567800-01	Rice	nucleus	21.98	25.07
Os06t0284500-00	Rice	nucleus	16.67	23.88
Os01t0865800-00	Rice	nucleus	17.87	22.49
Os05t0440000-00	Rice	nucleus	16.91	21.41
Os03t0764900-01	Rice	nucleus	17.15	19.78
Os02t0252400-01	Rice	nucleus	14.98	16.62
HORVU2Hr1G095390.1	Barley	cytosol, mitochondrion, nucleus	7.25	13.57
Os07t0508700-00	Rice	cytosol	2.42	9.62

Protein Annotations

MapMan:15.5.1.5	EntrezGene:4334599	ProteinID:BAF13639.1	ProteinID:BAS87092.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	EnsemblPlantsGene:Os03g0821200	EnsemblPlants:Os03t0821200-00	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361
PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF66	UniProt:Q0DM99	UniParc:UPI0000E122A3	RefSeq:XP_015628806.1
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

DNA BINDING WITH ONE FINGER 16Similar to Zn finger protein (Fragment). (Os03t0821200-00)

Coordinates

chr3:+:34454495..34456741

Molecular Weight (calculated)

41247.0 Da

IEP (calculated)

9.249

GRAVY (calculated)

-0.378

Length

414 amino acids

Sequence
(BLAST)

001: MVFSSVPAVY LDPPNWNQQQ QQAHHGQLPS GGNGGGGGGG GGGVDAHHHH HHHHHQLPPM PPHHGGLMAP RPDMVAAAVA ASGGGGGGGG PTGGTAVRPG
101: SMTERARLAK IPQPEPGLKC PRCESTNTKF CYFNNYSLSQ PRHFCKTCRR YWTRGGALRN VPVGGGCRRN KRTKSSKSSS STSAAGSASA TGGTSSSTSS
201: TATGGSSSAA AAAAMMPPQA QLPFLASLHH PLGGGDHYSS GASRLGFPGL SSLDPVDYQL GGGAAAAAAI GLEQWRLPQI QQFPFLSRND AMPPPMSGIY
301: PFDAEAAADA AGFAGQLLAG TKVPGSSGLI TQLASVKMED SNAQSAAMNS SPREFLGLPG NLQFWGGGNG AGPGGNGDGA TGGSGAGVAP GGGGSGGGWA
401: DLSGFNSSSS GNIL

Best Arabidopsis Sequence Match ( AT3G55370.2 )
(BLAST)

001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF

Arabidopsis Description

OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.