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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G065250.3 Barley nucleus 54.3 25.53
HORVU5Hr1G048700.1 Barley nucleus 13.57 9.01
HORVU2Hr1G047750.4 Barley plastid 8.6 8.41
VIT_08s0007g00180.t01 Wine grape nucleus 12.67 8.12
GSMUA_Achr6P33410_001 Banana nucleus 9.05 8.1
HORVU5Hr1G021290.1 Barley nucleus 12.22 7.83
Os03t0821200-00 Rice nucleus 13.57 7.25
KXG37254 Sorghum nucleus 13.57 6.9
HORVU3Hr1G083460.1 Barley nucleus 9.95 6.65
HORVU1Hr1G074140.1 Barley nucleus, vacuole 9.95 6.4
HORVU2Hr1G013060.1 Barley nucleus, plastid 8.6 6.38
HORVU5Hr1G113220.6 Barley nucleus 12.67 6.22
HORVU7Hr1G043250.2 Barley nucleus 7.24 5.63
PGSC0003DMT400049288 Potato nucleus 9.5 5.61
Solyc10g086440.1.1 Tomato nucleus 9.05 5.52
CDX74947 Canola nucleus 7.69 5.23
Bra005181.1-P Field mustard nucleus 7.69 5.23
AT2G37590.1 Thale cress nucleus 7.69 5.15
HORVU1Hr1G005390.2 Barley nucleus 8.14 4.93
CDX91370 Canola nucleus 7.24 4.92
CDX79743 Canola nucleus 6.33 4.78
Bra000008.1-P Field mustard nucleus 6.33 4.78
Zm00001d012963_P001 Maize plastid, vacuole 12.67 4.46
HORVU5Hr1G097620.1 Barley nucleus 7.69 4.4
CDY65260 Canola nucleus 5.88 4.21
CDX93365 Canola nucleus 5.88 4.21
Bra017171.1-P Field mustard nucleus 5.88 4.21
HORVU5Hr1G113190.2 Barley nucleus, plastid 4.52 3.5
HORVU3Hr1G116260.1 Barley nucleus 4.52 3.17
HORVU3Hr1G116270.2 Barley nucleus 4.98 3.16
HORVU3Hr1G116220.1 Barley nucleus, plastid 5.43 3.02
CDY07781 Canola nucleus 2.71 2.8
HORVU5Hr1G097600.1 Barley nucleus, plastid 2.71 2.59
Protein Annotations
EnsemblPlants:HORVU2Hr1G095390.1EnsemblPlantsGene:HORVU2Hr1G095390GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
PANTHER:PTHR31992PANTHER:PTHR31992:SF28SEG:segUniParc:UPI000B487150UniProt:A0A287J0M7MapMan:35.1
Description
No Description!
Coordinates
chrchr2H:+:669560144..669561110
Molecular Weight (calculated)
22022.7 Da
IEP (calculated)
5.101
GRAVY (calculated)
-0.413
Length
221 amino acids
Sequence
(BLAST)
001: MLGAAPNKNP KLAHEGAAHD LNLAFPHHQG GMQAQADYMA FPSLESSSMC NPGGGGMAGN GARASGALSA MELLRSTGCY MPLQMPMQMP GDYGAAGFSL
101: GEFRAPPPPP QSQSQSLMGF SLDAHGPVGG ASSAGYGSSA AMQGMQDRAS RLLFAFEDLK PTASSGGAGG GESGGGSGGA ADGGGHQFEQ GNKEQQGNGT
201: PVGQPDTPGF WNGMIGGGGT W
Best Arabidopsis Sequence Match ( AT3G61850.4 )
(BLAST)
001: MDATKWTQGF QEMINVKPME QMISSTNNNT PQQQPTFIAT NTRPNATASN GGSGGNTNNT ATMETRKARP QEKVNCPRCN STNTKFCYYN NYSLTQPRYF
101: CKGCRRYWTE GGSLRNVPVG GSSRKNKRSS TPLASPSNPK LPDLNPPILF SSQIPNKSNK DLNLLSFPVM QDHHHHGMSH FFHMPKIENN NTSSSIYASS
201: SPVSALELLR SNGVSSRGMN TFLPGQMMDS NSVLYSSLGF PTMPDYKQSN NNLSFSIDHH QGIGHNTINS NQRAQDNNDD MNGASRVLFP FSDMKELSST
301: TQEKSHGNNT YWNGMFSNTG GSSW
Arabidopsis Description
DAG1Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:B3H6D1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.