Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 3
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX91370 | Canola | nucleus | 99.08 | 99.08 |
| Bra005181.1-P | Field mustard | nucleus | 98.46 | 98.46 |
| CDY07781 | Canola | nucleus | 60.31 | 91.59 |
| CDX93365 | Canola | nucleus | 86.46 | 90.94 |
| CDX79743 | Canola | nucleus | 81.54 | 90.44 |
| CDY65260 | Canola | nucleus | 85.85 | 90.29 |
| AT2G37590.1 | Thale cress | nucleus | 88.0 | 86.67 |
| CDY70840 | Canola | nucleus | 16.92 | 48.67 |
| VIT_08s0007g00180.t01 | Wine grape | nucleus | 46.15 | 43.48 |
| Zm00001d034653_P001 | Maize | nucleus | 28.92 | 41.96 |
| CDX73385 | Canola | nucleus | 36.62 | 39.4 |
| CDY40358 | Canola | nucleus | 38.77 | 37.84 |
| CDY70704 | Canola | nucleus | 42.15 | 37.53 |
| Solyc10g086440.1.1 | Tomato | nucleus | 40.92 | 36.74 |
| CDY55422 | Canola | nucleus | 44.62 | 36.16 |
| CDY55549 | Canola | nucleus | 44.62 | 36.07 |
| CDX80822 | Canola | nucleus | 44.92 | 35.96 |
| PGSC0003DMT400049288 | Potato | nucleus | 41.23 | 35.83 |
| CDY69145 | Canola | nucleus, plastid | 34.46 | 35.56 |
| CDY04855 | Canola | nucleus | 44.31 | 35.47 |
| CDY40213 | Canola | nucleus | 36.92 | 33.8 |
| Zm00001d034651_P002 | Maize | nucleus | 41.85 | 32.93 |
| Os03t0821200-00 | Rice | nucleus | 41.54 | 32.61 |
| HORVU5Hr1G113190.2 | Barley | nucleus, plastid | 28.62 | 32.52 |
| KXG37254 | Sorghum | nucleus | 42.77 | 31.95 |
| CDY15624 | Canola | nucleus | 32.62 | 31.74 |
| CDX95139 | Canola | nucleus | 32.31 | 31.25 |
| CDX76102 | Canola | nucleus | 36.62 | 31.23 |
| CDY06274 | Canola | nucleus | 29.23 | 30.25 |
| CDX77212 | Canola | nucleus | 31.38 | 30.0 |
| CDY61965 | Canola | nucleus | 28.62 | 29.9 |
| HORVU5Hr1G113220.6 | Barley | nucleus | 40.92 | 29.56 |
| CDY31735 | Canola | nucleus | 31.08 | 29.36 |
| TraesCS5B01G492600.1 | Wheat | nucleus | 40.31 | 28.98 |
| CDY53379 | Canola | nucleus | 19.38 | 28.77 |
| TraesCS5D01G493000.1 | Wheat | nucleus | 40.0 | 28.57 |
| TraesCS5A01G479400.1 | Wheat | nucleus | 40.92 | 28.48 |
| CDY08775 | Canola | nucleus | 16.62 | 27.55 |
| CDY29082 | Canola | nucleus | 20.0 | 27.08 |
| CDX90602 | Canola | nucleus | 20.0 | 26.97 |
| CDY59600 | Canola | nucleus | 19.38 | 25.82 |
| CDX77184 | Canola | nucleus | 20.31 | 25.78 |
| CDX78095 | Canola | nucleus | 18.77 | 25.21 |
| CDY31568 | Canola | nucleus | 20.0 | 25.19 |
| CDX80191 | Canola | nucleus | 19.69 | 24.9 |
| CDY09221 | Canola | nucleus | 18.77 | 23.64 |
| CDY72657 | Canola | nucleus | 21.23 | 23.63 |
| CDX87189 | Canola | nucleus | 18.15 | 23.6 |
| CDY70312 | Canola | nucleus | 20.62 | 23.59 |
| CDY02191 | Canola | nucleus | 21.23 | 23.47 |
| CDY40813 | Canola | nucleus | 20.31 | 23.32 |
| CDY04620 | Canola | nucleus | 18.15 | 23.23 |
| CDY70838 | Canola | nucleus | 21.85 | 23.2 |
| CDY33948 | Canola | nucleus | 21.54 | 23.18 |
| CDY71684 | Canola | nucleus | 23.69 | 22.99 |
| CDX71050 | Canola | nucleus | 17.85 | 22.92 |
| CDY70666 | Canola | nucleus | 20.92 | 22.9 |
| CDX87270 | Canola | nucleus | 24.0 | 22.87 |
| CDY16836 | Canola | nucleus | 18.77 | 22.85 |
| CDY42836 | Canola | nucleus | 20.0 | 22.73 |
| CDX81292 | Canola | nucleus | 19.69 | 22.7 |
| CDY03494 | Canola | nucleus | 24.0 | 22.67 |
| CDY72049 | Canola | nucleus | 20.62 | 22.56 |
| CDY50231 | Canola | nucleus | 17.54 | 22.53 |
| CDX92613 | Canola | nucleus | 23.69 | 22.45 |
| CDY71763 | Canola | nucleus | 23.69 | 22.45 |
| CDY16754 | Canola | nucleus | 23.38 | 22.35 |
| CDX86775 | Canola | nucleus | 21.23 | 22.19 |
| CDY37834 | Canola | nucleus | 20.62 | 22.04 |
| CDX88742 | Canola | nucleus | 18.77 | 22.02 |
| CDY64622 | Canola | nucleus | 21.54 | 21.67 |
| CDY00373 | Canola | nucleus | 17.23 | 21.54 |
| CDY35454 | Canola | nucleus | 22.46 | 21.34 |
| Zm00001d012963_P001 | Maize | plastid, vacuole | 41.23 | 21.34 |
| CDY61064 | Canola | nucleus | 16.92 | 21.07 |
| CDY08392 | Canola | nucleus | 21.85 | 21.01 |
| CDX71704 | Canola | nucleus | 21.54 | 20.9 |
| CDY51722 | Canola | nucleus | 17.85 | 20.86 |
| CDY66590 | Canola | nucleus | 20.92 | 20.8 |
| CDY15678 | Canola | nucleus | 20.92 | 20.8 |
| CDY07156 | Canola | nucleus | 17.85 | 20.79 |
| CDY41539 | Canola | nucleus | 23.38 | 20.77 |
| CDY00341 | Canola | nucleus | 23.38 | 20.65 |
| CDX80030 | Canola | nucleus | 23.08 | 20.6 |
| CDX89134 | Canola | extracellular, vacuole | 21.85 | 20.4 |
| CDY35729 | Canola | nucleus | 18.77 | 20.4 |
| CDX90142 | Canola | nucleus | 19.69 | 20.25 |
| CDX84369 | Canola | nucleus | 23.08 | 20.22 |
| CDY57876 | Canola | nucleus | 22.15 | 19.94 |
| CDX83357 | Canola | nucleus | 22.77 | 19.79 |
| CDX95706 | Canola | nucleus | 22.46 | 19.78 |
| CDY61727 | Canola | nucleus | 22.15 | 19.25 |
| CDY27314 | Canola | nucleus | 21.23 | 19.17 |
| CDY24798 | Canola | nucleus | 23.69 | 17.0 |
| CDY08776 | Canola | nucleus | 4.0 | 15.12 |
| HORVU2Hr1G095390.1 | Barley | cytosol, mitochondrion, nucleus | 5.23 | 7.69 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078CDM1 | EnsemblPlants:CDX74947 | ProteinID:CDX74947 | ProteinID:CDX74947.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00116954001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI0004EF487A |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaA05g06930D
Coordinates
chrLK031802:-:1608563..1609743
Molecular Weight (calculated)
34738.9 Da
IEP (calculated)
9.067
GRAVY (calculated)
-0.677
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSIQAYL DSSNWQQAPP SNYNQGGAGA SATGGHGLPP QLQPQSQPLS NGSGGSGSIR PGSMVDRARQ ANVAMPEAAL KCPRCESTNT KFCYFNNYSL
101: TQPRHFCKTC RRYWTRGGAL RNVPVGGGCR RNRRTKSSSN NNSSTATSNN TSFSSAASGN ASTISAILSS NYGGTHENIL SQILSPGRLM NPGYNHHLGD
201: LTDNTKTDNN MSLLNYGGLS QDLRSIHMGN SGGSLMSCVD EWRTASHHQQ PQILGGGNLE DSNPNPSSNG FYPFESPRIT SASISSALAS QFSSVKVEDN
301: NPYKWVNVNG NCSSWTDLST FGSSR
101: TQPRHFCKTC RRYWTRGGAL RNVPVGGGCR RNRRTKSSSN NNSSTATSNN TSFSSAASGN ASTISAILSS NYGGTHENIL SQILSPGRLM NPGYNHHLGD
201: LTDNTKTDNN MSLLNYGGLS QDLRSIHMGN SGGSLMSCVD EWRTASHHQQ PQILGGGNLE DSNPNPSSNG FYPFESPRIT SASISSALAS QFSSVKVEDN
301: NPYKWVNVNG NCSSWTDLST FGSSR
001: MVFSSIQAYL DSSNWQQAPP SNYNHDGTGA SANGGHVLRP QLQPQQQPQQ QPHPNGSGGG GGGGGGSIRA GSMVDRARQA NVALPEAALK CPRCESTNTK
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
Arabidopsis Description
DOF2.4Dof zinc finger protein DOF2.4 [Source:UniProtKB/Swiss-Prot;Acc:O80928]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.