Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034651_P002 | Maize | nucleus | 79.46 | 43.1 |
| CDY07781 | Canola | nucleus | 36.16 | 37.85 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 36.16 | 32.79 |
| CDX93365 | Canola | nucleus | 41.07 | 29.77 |
| Bra000008.1-P | Field mustard | nucleus | 38.84 | 29.69 |
| AT2G37590.1 | Thale cress | nucleus | 43.3 | 29.39 |
| CDX79743 | Canola | nucleus | 38.39 | 29.35 |
| CDY65260 | Canola | nucleus | 40.18 | 29.13 |
| Bra005181.1-P | Field mustard | nucleus | 41.96 | 28.92 |
| CDX74947 | Canola | nucleus | 41.96 | 28.92 |
| CDX91370 | Canola | nucleus | 41.96 | 28.92 |
| Bra017171.1-P | Field mustard | nucleus | 39.73 | 28.8 |
| VIT_08s0007g00180.t01 | Wine grape | nucleus | 43.3 | 28.12 |
| Zm00001d012963_P001 | Maize | plastid, vacuole | 73.66 | 26.27 |
| Solyc10g086440.1.1 | Tomato | nucleus | 41.07 | 25.41 |
| Zm00001d028625_P002 | Maize | nucleus | 42.86 | 24.81 |
| Zm00001d047802_P001 | Maize | nucleus | 42.86 | 24.74 |
| PGSC0003DMT400049288 | Potato | nucleus | 41.07 | 24.6 |
| Zm00001d030727_P002 | Maize | nucleus | 36.61 | 24.05 |
| Zm00001d041549_P001 | Maize | nucleus | 35.71 | 23.32 |
| Zm00001d035651_P001 | Maize | nucleus | 37.95 | 23.29 |
| Zm00001d011058_P001 | Maize | nucleus | 34.82 | 23.08 |
| Zm00001d051700_P001 | Maize | mitochondrion | 25.0 | 22.13 |
| Zm00001d017788_P001 | Maize | nucleus | 27.23 | 21.18 |
| Zm00001d051577_P001 | Maize | nucleus | 27.23 | 20.54 |
| Zm00001d013783_P001 | Maize | nucleus | 26.34 | 20.27 |
| Zm00001d017900_P001 | Maize | nucleus | 26.79 | 20.0 |
| Zm00001d033093_P001 | Maize | nucleus | 30.8 | 19.17 |
| Zm00001d042736_P001 | Maize | nucleus | 27.23 | 18.77 |
| Zm00001d051439_P001 | Maize | nucleus | 29.91 | 18.26 |
| Zm00001d021591_P001 | Maize | nucleus | 29.02 | 18.06 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 26.34 | 18.04 |
| Zm00001d026096_P001 | Maize | nucleus, plastid | 28.57 | 17.98 |
| Zm00001d017575_P001 | Maize | nucleus | 29.02 | 17.38 |
| Zm00001d012280_P001 | Maize | nucleus | 25.89 | 17.16 |
| Zm00001d006463_P001 | Maize | plastid | 25.89 | 16.52 |
| Zm00001d029512_P001 | Maize | nucleus | 25.0 | 15.95 |
| Zm00001d034163_P001 | Maize | nucleus | 24.55 | 15.24 |
| Zm00001d013200_P001 | Maize | nucleus, plastid | 24.55 | 14.91 |
| Zm00001d002642_P001 | Maize | nucleus | 31.25 | 14.61 |
Protein Annotations
| MapMan:15.5.1.5 | UniProt:A0A1D6L9X9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | ProteinID:ONM10942.1 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 |
| UniParc:UPI0002214E1B | EnsemblPlantsGene:Zm00001d034653 | EnsemblPlants:Zm00001d034653_P001 | EnsemblPlants:Zm00001d034653_T001 | InterPro:Znf_Dof | SEG:seg |
Description
C2C2-Dof-transcription factor 28Dof zinc finger protein DOF3.6
Coordinates
chr1:+:298949392..298950066
Molecular Weight (calculated)
23027.9 Da
IEP (calculated)
10.782
GRAVY (calculated)
-0.560
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLSGTGGG GGGNVDAHAH HHQLPSMPPP ARVGALMAPR PNMAAVVAAS GGSTSDGSGP TGGGSVIRSG SMTERARLAK IPQPEPGLKC PRCESTNTKF
101: CYFNNYSLSQ PRHFCKTCRR YWTRGGALRN IPVGGGCRRN KRTKSSNSSS ATSASRASGT SSSTSSTATG GNSAASIKLP HQGHGGQLPF LASLHHPFTD
201: GDHHYNTGAS RLGFPGLSSL DPMD
101: CYFNNYSLSQ PRHFCKTCRR YWTRGGALRN IPVGGGCRRN KRTKSSNSSS ATSASRASGT SSSTSSTATG GNSAASIKLP HQGHGGQLPF LASLHHPFTD
201: GDHHYNTGAS RLGFPGLSSL DPMD
001: MVFSSIQAYL DSSNWQQAPP SNYNHDGTGA SANGGHVLRP QLQPQQQPQQ QPHPNGSGGG GGGGGGSIRA GSMVDRARQA NVALPEAALK CPRCESTNTK
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
Arabidopsis Description
DOF2.4Dof zinc finger protein DOF2.4 [Source:UniProtKB/Swiss-Prot;Acc:O80928]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.