Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74947 | Canola | nucleus | 86.67 | 88.0 |
| Bra005181.1-P | Field mustard | nucleus | 86.36 | 87.69 |
| CDX91370 | Canola | nucleus | 86.06 | 87.38 |
| CDX93365 | Canola | nucleus | 81.52 | 87.06 |
| Bra000008.1-P | Field mustard | nucleus | 76.06 | 85.67 |
| CDY65260 | Canola | nucleus | 80.0 | 85.44 |
| Bra017171.1-P | Field mustard | nucleus | 79.7 | 85.11 |
| CDY07781 | Canola | nucleus | 54.85 | 84.58 |
| CDX79743 | Canola | nucleus | 74.55 | 83.96 |
| Zm00001d034653_P001 | Maize | nucleus | 29.39 | 43.3 |
| VIT_08s0007g00180.t01 | Wine grape | nucleus | 44.55 | 42.61 |
| Solyc10g086440.1.1 | Tomato | nucleus | 40.0 | 36.46 |
| PGSC0003DMT400049288 | Potato | nucleus | 40.61 | 35.83 |
| AT5G02460.1 | Thale cress | nucleus | 41.52 | 34.34 |
| HORVU5Hr1G113190.2 | Barley | nucleus, plastid | 29.39 | 33.92 |
| Os03t0821200-00 | Rice | nucleus | 41.52 | 33.09 |
| AT3G55370.3 | Thale cress | nucleus | 36.67 | 32.88 |
| Zm00001d034651_P002 | Maize | nucleus | 40.3 | 32.2 |
| KXG37254 | Sorghum | nucleus | 41.82 | 31.72 |
| HORVU5Hr1G113220.6 | Barley | nucleus | 41.82 | 30.67 |
| TraesCS5B01G492600.1 | Wheat | nucleus | 41.52 | 30.31 |
| TraesCS5D01G493000.1 | Wheat | nucleus | 41.21 | 29.89 |
| AT2G28810.1 | Thale cress | nucleus | 30.3 | 29.41 |
| TraesCS5A01G479400.1 | Wheat | nucleus | 41.52 | 29.34 |
| AT1G07640.3 | Thale cress | nucleus | 29.7 | 28.91 |
| AT5G60200.1 | Thale cress | nucleus | 19.09 | 24.51 |
| AT5G60850.1 | Thale cress | nucleus | 21.82 | 23.45 |
| AT3G52440.2 | Thale cress | nucleus | 18.18 | 22.56 |
| AT2G28510.1 | Thale cress | nucleus | 19.39 | 22.22 |
| AT4G24060.1 | Thale cress | nucleus | 23.03 | 22.22 |
| AT3G45610.1 | Thale cress | nucleus | 16.36 | 22.04 |
| AT1G21340.1 | Thale cress | nucleus | 17.27 | 21.92 |
| AT5G65590.1 | Thale cress | nucleus | 20.61 | 21.52 |
| Zm00001d012963_P001 | Maize | plastid, vacuole | 39.7 | 20.86 |
| AT1G28310.2 | Thale cress | nucleus | 20.91 | 20.6 |
| AT3G61850.4 | Thale cress | nucleus | 20.0 | 20.37 |
| AT1G64620.1 | Thale cress | nucleus | 21.52 | 20.17 |
| AT5G62940.1 | Thale cress | nucleus | 22.42 | 19.89 |
| AT4G00940.2 | Thale cress | nucleus | 16.67 | 18.71 |
| AT2G46590.2 | Thale cress | nucleus | 20.91 | 18.7 |
| HORVU2Hr1G095390.1 | Barley | cytosol, mitochondrion, nucleus | 5.15 | 7.69 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:818336 | ProteinID:AAC23629.1 | EMBL:AB493581 | ProteinID:AEC09422.1 | ArrayExpress:AT2G37590 |
| EnsemblPlantsGene:AT2G37590 | RefSeq:AT2G37590 | TAIR:AT2G37590 | RefSeq:AT2G37590-TAIR-G | EnsemblPlants:AT2G37590.1 | TAIR:AT2G37590.1 |
| Symbol:ATDOF2.4 | EMBL:BT030014 | UniProt:C0SV78 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0046872 | InterPro:IPR003851 | RefSeq:NP_181295.1 |
| UniProt:O80928 | PFAM:PD007478 | PFAM:PF02701 | PO:PO:0000013 | PO:PO:0000026 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0000400 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI00000A6754 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
DOF2.4Dof zinc finger protein DOF2.4 [Source:UniProtKB/Swiss-Prot;Acc:O80928]
Coordinates
chr2:+:15769086..15770805
Molecular Weight (calculated)
35332.4 Da
IEP (calculated)
9.223
GRAVY (calculated)
-0.733
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSIQAYL DSSNWQQAPP SNYNHDGTGA SANGGHVLRP QLQPQQQPQQ QPHPNGSGGG GGGGGGSIRA GSMVDRARQA NVALPEAALK CPRCESTNTK
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.