Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70838 | Canola | nucleus | 83.54 | 86.27 |
| CDY70312 | Canola | nucleus | 75.95 | 84.51 |
| Bra024399.1-P | Field mustard | nucleus | 81.65 | 84.31 |
| Bra037822.1-P | Field mustard | nucleus | 75.63 | 84.15 |
| Bra031853.1-P | Field mustard | nucleus | 80.38 | 83.55 |
| CDY37834 | Canola | nucleus | 80.06 | 83.22 |
| CDY08775 | Canola | nucleus | 51.58 | 83.16 |
| CDY33948 | Canola | nucleus | 79.43 | 83.11 |
| CDX81292 | Canola | nucleus | 70.57 | 79.08 |
| KRH74458 | Soybean | nucleus | 40.51 | 37.98 |
| KRH39485 | Soybean | nucleus | 39.24 | 36.26 |
| Solyc11g010940.1.1 | Tomato | nucleus | 41.77 | 35.2 |
| PGSC0003DMT400041580 | Potato | nucleus | 41.46 | 34.66 |
| KRG99513 | Soybean | nucleus | 38.61 | 33.06 |
| KRH45516 | Soybean | nucleus | 42.09 | 33.0 |
| Solyc02g090310.1.1 | Tomato | nucleus | 20.89 | 25.38 |
| AT3G45610.1 | Thale cress | nucleus | 18.99 | 24.49 |
| AT5G60200.1 | Thale cress | nucleus | 19.3 | 23.74 |
| PGSC0003DMT400025984 | Potato | nucleus | 20.89 | 23.57 |
| VIT_00s0218g00040.t01 | Wine grape | nucleus | 25.0 | 23.37 |
| AT5G60850.1 | Thale cress | nucleus | 22.15 | 22.8 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 21.52 | 22.52 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 21.84 | 22.48 |
| GSMUA_Achr10P... | Banana | nucleus | 20.57 | 22.26 |
| AT1G21340.1 | Thale cress | nucleus | 18.04 | 21.92 |
| HORVU5Hr1G097600.1 | Barley | nucleus, plastid | 15.82 | 21.55 |
| AT2G28510.1 | Thale cress | nucleus | 19.62 | 21.53 |
| AT2G28810.1 | Thale cress | nucleus | 23.1 | 21.47 |
| AT3G55370.3 | Thale cress | nucleus | 25.0 | 21.47 |
| KRH28526 | Soybean | nucleus | 22.78 | 21.24 |
| KRH76935 | Soybean | nucleus | 22.47 | 21.13 |
| AT3G52440.2 | Thale cress | nucleus | 17.72 | 21.05 |
| AT1G07640.3 | Thale cress | nucleus | 22.47 | 20.94 |
| AT1G28310.2 | Thale cress | nucleus | 22.15 | 20.9 |
| AT4G00940.2 | Thale cress | nucleus | 19.3 | 20.75 |
| AT2G37590.1 | Thale cress | nucleus | 21.52 | 20.61 |
| VIT_00s0253g00060.t01 | Wine grape | nucleus | 22.78 | 20.45 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 20.25 | 20.19 |
| KRH04709 | Soybean | nucleus | 21.84 | 19.6 |
| Os03t0764900-01 | Rice | nucleus | 22.15 | 19.5 |
| AT1G64620.1 | Thale cress | nucleus | 21.52 | 19.32 |
| AT2G46590.2 | Thale cress | nucleus | 22.15 | 18.97 |
| Zm00001d034163_P001 | Maize | nucleus | 21.52 | 18.84 |
| KXG37485 | Sorghum | nucleus | 22.47 | 18.68 |
| AT3G61850.4 | Thale cress | nucleus | 18.99 | 18.52 |
| AT5G02460.1 | Thale cress | nucleus | 23.1 | 18.3 |
| TraesCS5B01G406500.1 | Wheat | nucleus | 21.84 | 18.06 |
| TraesCS5D01G412000.1 | Wheat | nucleus | 21.52 | 17.89 |
| Zm00001d013200_P001 | Maize | nucleus, plastid | 20.89 | 17.89 |
| TraesCS5A01G401800.1 | Wheat | nucleus | 21.52 | 17.85 |
| AT4G24060.1 | Thale cress | nucleus | 19.3 | 17.84 |
| HORVU5Hr1G097620.1 | Barley | nucleus | 21.2 | 17.36 |
| AT5G62940.1 | Thale cress | nucleus | 19.62 | 16.67 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:836685 | UniProt:A0A178UIB2 | EMBL:AB493815 | ProteinID:AED98074.1 | ArrayExpress:AT5G65590 |
| EnsemblPlantsGene:AT5G65590 | RefSeq:AT5G65590 | TAIR:AT5G65590 | RefSeq:AT5G65590-TAIR-G | EnsemblPlants:AT5G65590.1 | TAIR:AT5G65590.1 |
| Unigene:At.28900 | ProteinID:BAA98178.1 | EMBL:BT014981 | EMBL:BT015717 | UniProt:C0SVW2 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005975 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0010052 | GO:GO:0010118 | GO:GO:0016043 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0045893 | GO:GO:0046872 | GO:GO:1902066 | InterPro:IPR003851 | RefSeq:NP_201362.1 | ProteinID:OAO93548.1 |
| PFAM:PD007478 | PFAM:PF02701 | PO:PO:0000293 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 |
| PANTHER:PTHR31992:SF82 | UniProt:Q9LSL6 | UniParc:UPI00000A4758 | InterPro:Znf_Dof | SEG:seg | : |
Description
DOF5.7SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]
Coordinates
chr5:-:26211746..26213233
Molecular Weight (calculated)
34855.7 Da
IEP (calculated)
9.042
GRAVY (calculated)
-0.772
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.