Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99513 | Soybean | nucleus | 75.43 | 82.38 |
| KRH74458 | Soybean | nucleus | 42.43 | 50.74 |
| KRH39485 | Soybean | nucleus | 40.94 | 48.25 |
| Bra037822.1-P | Field mustard | nucleus | 31.76 | 45.07 |
| CDY70312 | Canola | nucleus | 31.51 | 44.72 |
| CDY08775 | Canola | nucleus | 21.34 | 43.88 |
| CDY70838 | Canola | nucleus | 32.75 | 43.14 |
| CDY37834 | Canola | nucleus | 32.26 | 42.76 |
| Bra024399.1-P | Field mustard | nucleus | 32.26 | 42.48 |
| Bra031853.1-P | Field mustard | nucleus | 32.01 | 42.43 |
| CDX81292 | Canola | nucleus | 29.53 | 42.2 |
| AT5G65590.1 | Thale cress | nucleus | 33.0 | 42.09 |
| CDY33948 | Canola | nucleus | 31.51 | 42.05 |
| Solyc11g010940.1.1 | Tomato | nucleus | 38.21 | 41.07 |
| PGSC0003DMT400041580 | Potato | nucleus | 38.46 | 41.01 |
| KRG96269 | Soybean | nucleus | 12.66 | 29.65 |
| KRH53547 | Soybean | nucleus | 14.89 | 29.13 |
| KRG97209 | Soybean | nucleus | 16.87 | 26.98 |
| KRH47883 | Soybean | nucleus | 18.86 | 26.48 |
| KRH06442 | Soybean | nucleus | 17.62 | 25.72 |
| KRH22943 | Soybean | nucleus | 18.11 | 25.61 |
| KRH24808 | Soybean | nucleus | 19.35 | 25.41 |
| KRH24943 | Soybean | nucleus | 19.11 | 25.25 |
| KRG89059 | Soybean | nucleus | 19.11 | 24.84 |
| VIT_00s0218g00040.t01 | Wine grape | nucleus | 20.6 | 24.56 |
| KRH10276 | Soybean | nucleus | 18.36 | 24.34 |
| KRH23056 | Soybean | nucleus | 16.13 | 24.16 |
| KRH68931 | Soybean | nucleus | 17.37 | 23.89 |
| KRH10402 | Soybean | nucleus | 16.63 | 23.51 |
| KRH64383 | Soybean | nucleus | 17.12 | 23.23 |
| KRH29808 | Soybean | nucleus, plastid | 19.11 | 22.99 |
| KRG92523 | Soybean | nucleus | 17.12 | 22.85 |
| KRH56758 | Soybean | nucleus | 16.38 | 22.6 |
| KRH21495 | Soybean | nucleus | 15.38 | 22.3 |
| KRH10827 | Soybean | nucleus | 15.63 | 22.11 |
| KRH20416 | Soybean | nucleus | 19.35 | 22.1 |
| KRH72174 | Soybean | nucleus | 15.88 | 21.92 |
| KRH50083 | Soybean | nucleus | 18.86 | 21.84 |
| KRG96256 | Soybean | nucleus | 14.64 | 21.77 |
| KRH03180 | Soybean | nucleus | 16.13 | 21.67 |
| KRH46814 | Soybean | nucleus | 19.6 | 21.53 |
| KRH54755 | Soybean | nucleus | 16.13 | 21.45 |
| KRH34272 | Soybean | nucleus | 17.87 | 21.43 |
| KRH28526 | Soybean | nucleus | 17.87 | 21.24 |
| KRH01640 | Soybean | nucleus | 19.11 | 21.21 |
| KRH50082 | Soybean | nucleus | 15.14 | 21.18 |
| KRH21403 | Soybean | nucleus | 16.63 | 21.14 |
| KRH76935 | Soybean | nucleus | 17.62 | 21.13 |
| KRG99864 | Soybean | nucleus | 18.86 | 20.94 |
| KRH50000 | Soybean | nucleus | 17.12 | 20.78 |
| KRH10904 | Soybean | nucleus | 16.13 | 20.77 |
| KRH64521 | Soybean | nucleus | 14.89 | 20.76 |
| KRH21402 | Soybean | nucleus | 18.36 | 20.73 |
| KRH10907 | Soybean | nucleus | 18.11 | 20.68 |
| KRH04709 | Soybean | nucleus | 17.87 | 20.45 |
| KRH53419 | Soybean | nucleus | 14.39 | 20.07 |
| KRH70477 | Soybean | nucleus | 18.36 | 19.95 |
| KRH32857 | Soybean | extracellular, vacuole | 16.38 | 19.64 |
| KRH20497 | Soybean | nucleus | 16.38 | 19.64 |
| KRH63162 | Soybean | nucleus | 16.38 | 19.35 |
| KRH20417 | Soybean | nucleus | 15.63 | 19.21 |
| KRH63537 | Soybean | nucleus | 16.13 | 18.9 |
| KRH57071 | Soybean | nucleus | 15.38 | 18.79 |
| KRH03289 | Soybean | nucleus | 15.38 | 18.79 |
| KRH54395 | Soybean | nucleus | 16.13 | 18.41 |
Protein Annotations
| EntrezGene:102660774 | MapMan:15.5.1.5 | EMBL:ACUP02005243 | ncoils:Coil | EnsemblPlantsGene:GLYMA_08G276300 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | UniProt:I1KX56 | InterPro:IPR003851 | EnsemblPlants:KRH45516 | ProteinID:KRH45516 | ProteinID:KRH45516.1 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF62 |
| UniParc:UPI00023CB0E1 | InterPro:Znf_Dof | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:36860925..36862604
Molecular Weight (calculated)
43343.7 Da
IEP (calculated)
8.277
GRAVY (calculated)
-0.613
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAPATKDQ EPTQGRKFTT TTTTTTTTTR PAPEQGVKCP RCDSSNTKFC YYNNYSLTQP RHFCKTCRRY WTNGGALRNV PIGGGCRKNK RVVVKPSSSS
101: SSSLSSSPRF SNEFSLRGLN VPPSVEFNLG ALPFPASSRL NIPTTLNTGL FSNQFSSSPL SFGGDVNSVS VTNNALSGFQ LDATPATVLS NSLMSLASNN
201: NTQNNNNFWA LQDRSQGSTL LLSDSFNSSA MQSMQQSLNV HSSLASSIES LSCVNQDLHL KMQQQRYATM MFGGDSYHHK GGGGGGGDEN NGVSFSQTAN
301: RFENQKQLVG NPVMFQNLEI SKPPGSSVTE DPSGATVTTT VAPPTEWFFG NSSFSSAGNG NDGANSNNNN INININDANN NWSDALAWGD FQQQQQQQYS
401: ALP
101: SSSLSSSPRF SNEFSLRGLN VPPSVEFNLG ALPFPASSRL NIPTTLNTGL FSNQFSSSPL SFGGDVNSVS VTNNALSGFQ LDATPATVLS NSLMSLASNN
201: NTQNNNNFWA LQDRSQGSTL LLSDSFNSSA MQSMQQSLNV HSSLASSIES LSCVNQDLHL KMQQQRYATM MFGGDSYHHK GGGGGGGDEN NGVSFSQTAN
301: RFENQKQLVG NPVMFQNLEI SKPPGSSVTE DPSGATVTTT VAPPTEWFFG NSSFSSAGNG NDGANSNNNN INININDANN NWSDALAWGD FQQQQQQQYS
401: ALP
001: MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
Arabidopsis Description
DOF5.7SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.