CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97209	Soybean	nucleus	81.23	94.44
KRH06442	Soybean	nucleus	59.04	62.68
KRH47883	Soybean	nucleus	58.7	59.93
KRH53547	Soybean	nucleus	33.11	47.09
KRG92523	Soybean	nucleus	45.39	44.04
KRH64383	Soybean	nucleus	44.03	43.43
KRH34272	Soybean	nucleus	45.39	39.58
AT3G61850.4	Thale cress	nucleus	43.0	38.89
CDX71704	Canola	nucleus	43.69	38.21
Bra014418.1-P	Field mustard	nucleus	39.93	37.74
AT2G46590.2	Thale cress	nucleus	47.44	37.67
CDX86775	Canola	nucleus	39.93	37.62
KRG96269	Soybean	nucleus	21.5	36.63
CDX95706	Canola	nucleus	46.08	36.59
Bra000429.1-P	Field mustard	nucleus	46.08	36.59
Bra004525.1-P	Field mustard	nucleus	43.69	36.36
CDY64622	Canola	nucleus	39.59	35.91
CDX83357	Canola	nucleus	45.73	35.83
CDX80030	Canola	nucleus	44.03	35.44
CDY27314	Canola	nucleus	43.34	35.28
Bra039272.1-P	Field mustard	nucleus, plastid	43.34	35.28
CDY41539	Canola	nucleus	44.03	35.25
CDY57876	Canola	nucleus	43.34	35.18
CDY61727	Canola	nucleus	44.03	34.49
CDX89134	Canola	extracellular, vacuole	39.93	33.62
Os04t0567800-01	Rice	nucleus	41.64	33.61
Os02t0673700-01	Rice	nucleus	41.98	32.28
KXG26925	Sorghum	nucleus	42.66	32.22
TraesCS2B01G420400.1	Wheat	nucleus	41.3	32.18
Zm00001d026096_P001	Maize	nucleus, plastid	38.91	32.02
TraesCS2D01G399500.1	Wheat	nucleus	41.3	32.01
TraesCS2A01G402200.1	Wheat	nucleus	41.3	32.01
Zm00001d051439_P001	Maize	nucleus	39.59	31.61
Zm00001d017575_P001	Maize	nucleus	39.93	31.28
KRH24943	Soybean	nucleus	29.01	27.87
KRG89059	Soybean	nucleus	28.33	26.77
KRH22943	Soybean	nucleus	25.94	26.67
KXG31020	Sorghum	nucleus	41.3	26.48
GSMUA_Achr2P09970_001	Banana	nucleus	38.91	26.39
KRG96256	Soybean	nucleus	24.23	26.2
Zm00001d002642_P001	Maize	nucleus	42.32	25.89
KRH03289	Soybean	nucleus	29.01	25.76
KRH10402	Soybean	nucleus	24.91	25.61
KRH72174	Soybean	nucleus	25.26	25.34
KRH57071	Soybean	nucleus	28.33	25.15
KRH54395	Soybean	nucleus	30.03	24.93
KRH63537	Soybean	nucleus	29.01	24.71
KRH50082	Soybean	nucleus	23.89	24.31
KRH56758	Soybean	nucleus	23.21	23.29
KRH64521	Soybean	nucleus	22.87	23.18
KRH10276	Soybean	nucleus	23.89	23.03
KRH53419	Soybean	nucleus	22.53	22.84
KRH03180	Soybean	nucleus	22.87	22.33
KRH21495	Soybean	nucleus	20.82	21.94
KRH23056	Soybean	nucleus	20.14	21.93
KRH50083	Soybean	nucleus	25.94	21.84
KRH24808	Soybean	nucleus	22.87	21.82
KRH10907	Soybean	nucleus	26.28	21.81
KRH20416	Soybean	nucleus	26.28	21.81
KRH10827	Soybean	nucleus	21.16	21.75
KRH32857	Soybean	extracellular, vacuole	24.91	21.73
KRH76935	Soybean	nucleus	24.91	21.73
KRH28526	Soybean	nucleus	24.91	21.53
KRH54755	Soybean	nucleus	22.18	21.45
KRH10904	Soybean	nucleus	22.87	21.41
KRH21402	Soybean	nucleus	25.94	21.29
KRH70477	Soybean	nucleus	26.62	21.02
KRH01640	Soybean	nucleus	25.94	20.94
KRH21403	Soybean	nucleus	22.53	20.82
KRH39485	Soybean	nucleus	24.23	20.76
KRH20417	Soybean	nucleus	23.21	20.73
KRH74458	Soybean	nucleus	23.21	20.18
KRH04709	Soybean	nucleus	24.23	20.17
KRH29808	Soybean	nucleus, plastid	22.87	20.0
KRH46814	Soybean	nucleus	24.57	19.62
KRH50000	Soybean	nucleus	22.18	19.58
KRH63162	Soybean	nucleus	22.18	19.06
KRH20497	Soybean	nucleus	21.84	19.05
KRG99864	Soybean	nucleus	23.55	19.01
KRG99513	Soybean	nucleus	22.53	17.89
KRH45516	Soybean	nucleus	23.89	17.37

Protein Annotations

EntrezGene:100775598	MapMan:15.5.1.5	EMBL:ACUP02002128	EnsemblPlantsGene:GLYMA_03G258800	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:K7KH42	EnsemblPlants:KRH68931	ProteinID:KRH68931	ProteinID:KRH68931.1	PFAM:PD007478
PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF78	UniParc:UPI00023379BE
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:45317942..45320070

Molecular Weight (calculated)

32656.4 Da

IEP (calculated)

9.388

GRAVY (calculated)

-0.709

Length

293 amino acids

Sequence
(BLAST)

001: MHGYYRSLGK HGVRFFSLVF SLMHKFRAVH SELVRSMEDI GPNSCTRPVT EKKARPQEQL NCPRCSSTNT KFCYYNNYSL TQPRYFCKTC RRYWTEGGSL
101: RNVPVGGGSR KNKRVTSSKV PDLNPPISLS SVSAISSQNP KMQGVHDLNL AFPAAMDKYH HGTSPYVEMP KLEIGGDHST SHHSHHHSHS PSSAVELLRS
201: GMDSRGLNPY APNSLMSGSD HSLYTPGYPM QEIKPNLSFS VDDGFGNRSY GVQENGGGRL LFPFGDIKHL SAGLEVEHNK EQGNNSTGYW TGW

Best Arabidopsis Sequence Match ( AT3G61850.4 )
(BLAST)

001: MDATKWTQGF QEMINVKPME QMISSTNNNT PQQQPTFIAT NTRPNATASN GGSGGNTNNT ATMETRKARP QEKVNCPRCN STNTKFCYYN NYSLTQPRYF
101: CKGCRRYWTE GGSLRNVPVG GSSRKNKRSS TPLASPSNPK LPDLNPPILF SSQIPNKSNK DLNLLSFPVM QDHHHHGMSH FFHMPKIENN NTSSSIYASS
201: SPVSALELLR SNGVSSRGMN TFLPGQMMDS NSVLYSSLGF PTMPDYKQSN NNLSFSIDHH QGIGHNTINS NQRAQDNNDD MNGASRVLFP FSDMKELSST
301: TQEKSHGNNT YWNGMFSNTG GSSW

Arabidopsis Description

DAG1Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:B3H6D1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.