Factsheet for Bra000429.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83357	Canola	nucleus	98.64	97.33
CDX95706	Canola	nucleus	97.29	97.29
Bra004525.1-P	Field mustard	nucleus	84.55	88.64
AT2G46590.2	Thale cress	nucleus	87.26	87.26
Bra039272.1-P	Field mustard	nucleus, plastid	82.93	85.0
Bra014418.1-P	Field mustard	nucleus	55.01	65.48
KRG97209	Soybean	nucleus	35.23	51.59
KRH68931	Soybean	nucleus	36.59	46.08
Bra019247.1-P	Field mustard	nucleus	35.23	37.9
Bra013758.1-P	Field mustard	nucleus	34.15	37.5
GSMUA_Achr4P27160_001	Banana	nucleus	27.64	36.43
Bra037401.1-P	Field mustard	nucleus	29.27	36.24
Bra010548.1-P	Field mustard	nucleus	34.15	35.8
Zm00001d051439_P001	Maize	nucleus	34.96	35.15
Zm00001d017575_P001	Maize	nucleus	35.5	35.03
Os02t0673700-01	Rice	nucleus	35.5	34.38
TraesCS6A01G255500.1	Wheat	nucleus	36.31	34.18
TraesCS2B01G420400.1	Wheat	nucleus	34.69	34.04
TraesCS6D01G236700.1	Wheat	nucleus	36.04	34.02
TraesCS2A01G402200.1	Wheat	nucleus	34.69	33.86
TraesCS2D01G399500.1	Wheat	nucleus	34.69	33.86
Os04t0567800-01	Rice	nucleus	33.06	33.61
Bra027722.1-P	Field mustard	nucleus	29.27	33.33
KXG26925	Sorghum	nucleus	34.96	33.25
TraesCS6B01G270100.1	Wheat	nucleus	34.96	33.16
Zm00001d026096_P001	Maize	nucleus, plastid	31.98	33.15
Bra009587.1-P	Field mustard	nucleus	14.36	29.94
Bra012804.1-P	Field mustard	nucleus	19.51	29.88
Bra006923.1-P	Field mustard	nucleus	18.7	28.51
KXG31020	Sorghum	nucleus	34.96	28.23
Bra020261.1-P	Field mustard	nucleus	18.16	28.15
Bra002504.1-P	Field mustard	nucleus	19.51	27.91
HORVU6Hr1G065250.3	Barley	nucleus	35.5	27.87
Zm00001d002642_P001	Maize	nucleus	35.23	27.14
Bra035956.1-P	Field mustard	nucleus	19.24	26.59
Bra035873.1-P	Field mustard	nucleus	24.12	26.18
Bra010136.1-P	Field mustard	nucleus	25.47	25.54
Bra013003.1-P	Field mustard	nucleus	20.33	25.51
Bra035696.1-P	Field mustard	nucleus	17.34	25.0
Bra006675.1-P	Field mustard	nucleus	18.7	24.91
Bra010884.1-P	Field mustard	nucleus	19.78	24.75
Bra014752.1-P	Field mustard	nucleus	23.31	24.57
Bra029352.1-P	Field mustard	nucleus	18.16	24.1
Bra032891.1-P	Field mustard	nucleus	19.24	23.91
Bra030089.1-P	Field mustard	nucleus	19.24	23.83
Bra012277.1-P	Field mustard	nucleus	16.53	23.37
Bra017906.1-P	Field mustard	nucleus	15.99	23.32
Bra007156.1-P	Field mustard	nucleus	20.6	23.24
Bra000008.1-P	Field mustard	nucleus	18.43	23.21
Bra017171.1-P	Field mustard	nucleus	19.24	22.98
Bra005181.1-P	Field mustard	nucleus	20.05	22.77
Bra030696.1-P	Field mustard	nucleus	19.51	21.56
Bra035667.1-P	Field mustard	nucleus	18.16	19.48
Bra037822.1-P	Field mustard	nucleus	14.91	19.37
Bra024399.1-P	Field mustard	nucleus	15.99	19.28
Bra031588.1-P	Field mustard	nucleus	16.53	19.24
Bra031853.1-P	Field mustard	nucleus	15.72	19.08
Bra028872.1-P	Field mustard	nucleus	19.78	17.98
Bra005725.1-P	Field mustard	nucleus	19.51	17.87
Bra009588.1-P	Field mustard	plastid	4.88	10.11

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra000429	EnsemblPlants:Bra000429.1	EnsemblPlants:Bra000429.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:M4C8A1	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF15	UniParc:UPI000253FEBC	InterPro:Znf_Dof	SEG:seg	:

Description

AT2G46590 (E=2e-156) DAG2 | DAG2 (DOF AFFECTING GERMINATION 2); DNA binding / transcription factor

Coordinates

chrA03:+:11062202..11064029

Molecular Weight (calculated)

40534.8 Da

IEP (calculated)

8.259

GRAVY (calculated)

-0.849

Length

369 amino acids

Sequence
(BLAST)

001: MDATKWTQGF QDMMNVKPME QIMIPNNNTH QSNTMSDARP NTILTSNGVS AAGATVSGVS NNNNTALVVE RKARPQEKVN CPRCNSTNTK FCYYNNYSLT
101: QPRYFCKGCR RYWTEGGSLR NVPVGGSSKK NKRSSSSSNI LQATPSSLGL TTTLPDLNPP ILFSNQIPNK SKGSSHDLNL LSFPVMQDQN HHHHHGHMSQ
201: FLQMPKMEGN GNITHQQPSS LHGSSSSPVS ALELLRTGGN VSSRSGINSF MPSGPMLDSS NNVLYTSSGF PTMVDYKPSN LSFSTDHHQE MGHNNTSRSD
301: DHNDHNQGRI LFPFGDQMKE LTSSITQEVD HDDNQQQKSH GDNNNNSSSI PNTGYWSGMF NTTGGGSSW

Best Arabidopsis Sequence Match ( AT2G46590.2 )
(BLAST)

001: MDATKWTQGF QEMMNVKPME QIMIPNNNTH QPNTTSNARP NTILTSNGVS TAGATVSGVS NNNNNTAVVA ERKARPQEKL NCPRCNSTNT KFCYYNNYSL
101: TQPRYFCKGC RRYWTEGGSL RNVPVGGSSR KNKRSSSSSS SNILQTIPSS LPDLNPPILF SNQIHNKSKG SSQDLNLLSF PVMQDQHHHH VHMSQFLQMP
201: KMEGNGNITH QQQPSSSSSV YGSSSSPVSA LELLRTGVNV SSRSGINSSF MPSGSMMDSN TVLYTSSGFP TMVDYKPSNL SFSTDHQGLG HNSNNRSEAL
301: HSDHHQQGRV LFPFGDQMKE LSSSITQEVD HDDNQQQKSH GNNNNNNNSS PNNGYWSGMF STTGGGSSW

Arabidopsis Description

DOF2.5Dof zinc finger protein DOF2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.