Factsheet for Bra037401.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51722	Canola	nucleus	91.61	98.2
CDY07156	Canola	nucleus	88.59	94.62
AT4G00940.2	Thale cress	nucleus	78.86	79.93
KRH53547	Soybean	nucleus	27.85	40.29
VIT_16s0098g01420.t01	Wine grape	nucleus	34.9	36.24
KRH64383	Soybean	nucleus	34.9	35.02
Bra014418.1-P	Field mustard	nucleus	33.89	32.58
Solyc08g082910.1.1	Tomato	nucleus	34.23	32.08
GSMUA_Achr5P15160_001	Banana	nucleus	30.87	31.51
PGSC0003DMT400031928	Potato	nucleus	34.9	31.33
Bra039272.1-P	Field mustard	nucleus, plastid	36.24	30.0
Bra000429.1-P	Field mustard	nucleus	36.24	29.27
Bra004525.1-P	Field mustard	nucleus	33.89	28.69
Bra009587.1-P	Field mustard	nucleus	16.78	28.25
Bra020261.1-P	Field mustard	nucleus	22.48	28.15
Bra002504.1-P	Field mustard	nucleus	23.83	27.52
Bra012804.1-P	Field mustard	nucleus	22.15	27.39
Bra027722.1-P	Field mustard	nucleus	29.53	27.16
Bra019247.1-P	Field mustard	nucleus	31.21	27.11
Bra013758.1-P	Field mustard	nucleus	29.87	26.49
Bra010548.1-P	Field mustard	nucleus	30.87	26.14
Bra006923.1-P	Field mustard	nucleus	21.14	26.03
Bra035956.1-P	Field mustard	nucleus	21.48	23.97
Bra035696.1-P	Field mustard	nucleus	20.47	23.83
Bra006675.1-P	Field mustard	nucleus	22.15	23.83
Bra013003.1-P	Field mustard	nucleus	22.48	22.79
Bra035873.1-P	Field mustard	nucleus	25.5	22.35
Bra032891.1-P	Field mustard	nucleus	21.81	21.89
Bra017906.1-P	Field mustard	nucleus	18.46	21.74
Bra029352.1-P	Field mustard	nucleus	20.13	21.58
Bra010136.1-P	Field mustard	nucleus	26.51	21.47
Bra012277.1-P	Field mustard	nucleus	18.79	21.46
Bra030089.1-P	Field mustard	nucleus	20.81	20.81
Bra010884.1-P	Field mustard	nucleus	20.47	20.68
Bra031853.1-P	Field mustard	nucleus	20.81	20.39
Bra000008.1-P	Field mustard	nucleus	19.8	20.14
Bra037822.1-P	Field mustard	nucleus	19.13	20.07
Bra014752.1-P	Field mustard	nucleus	23.15	19.71
Bra024399.1-P	Field mustard	nucleus	19.8	19.28
Bra030696.1-P	Field mustard	nucleus	21.48	19.16
Bra007156.1-P	Field mustard	nucleus	20.47	18.65
Bra017171.1-P	Field mustard	nucleus	19.13	18.45
Bra005181.1-P	Field mustard	nucleus	19.8	18.15
Bra035667.1-P	Field mustard	nucleus	20.13	17.44
Bra031588.1-P	Field mustard	nucleus	18.12	17.03
Bra005725.1-P	Field mustard	nucleus	21.14	15.63
Bra028872.1-P	Field mustard	nucleus	21.14	15.52
Bra009588.1-P	Field mustard	plastid	4.03	6.74

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra037401	EnsemblPlants:Bra037401.1	EnsemblPlants:Bra037401.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:M4F8I9	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF78	UniParc:UPI00025420E5	InterPro:Znf_Dof	SEG:seg	:

Description

AT4G00940 (E=4e-093) | Dof-type zinc finger domain-containing protein

Coordinates

chrA09:-:709099..709995

Molecular Weight (calculated)

33475.4 Da

IEP (calculated)

7.953

GRAVY (calculated)

-1.092

Length

298 amino acids

Sequence
(BLAST)

001: MDHHHYTHHD HDQYQHHQMT ITNNNSYNTI ITTPPPRTTT TVDSTTMIMD AEKKMMTTMT SRPQEPRNCP RCNSSNTKFC YYNNYSLAQP RYLCKSCRRY
101: WTEGGSLRNV PVGGGSRKNK KLPLLQPNSS SSSPAKNLPD LNPPFAFTSS SSTSTSSNPS KSTHQNNNDL SLSFSYPTMQ ERAQGHYGHF TDQAMSGGQN
201: CLFSAPMGMI QFRQDYGHDH NKTDIGFSLD SNKVDSNNQN NFLVNGGGSK LMFPYGDRDE HHHDHERHDD GNKKRESGSS NELWSGIILG GDSGGPTW

Best Arabidopsis Sequence Match ( AT4G00940.1 )
(BLAST)

001: MDHHQYHHHD QYQHQMMTST NNNSYNTIVT TQPPPTTTTM DSTTATTMIM DDEKKLMTTM STRPQEPRNC PRCNSSNTKF CYYNNYSLAQ PRYLCKSCRR
101: YWTEGGSLRN VPVGGGSRKN KKLPFPNSST SSSTKNLPDL NPPFVFTSSA SSSNPSKTHQ NNNDLSLSFS SPMQDKRAQG HYGHFSEQVV TGGQNCLFQA
201: PMGMIQFRQE YDHEHPKKNL GFSLDRNEEE IGNHDNFVVN EEGSKMMYPY GDHEDRQQHH HVRHDDGNKK REGGSSNELW SGIILGGDSG GPTW

Arabidopsis Description

DOF4.1Dof zinc finger protein DOF4.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M161]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.