Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51722 | Canola | nucleus | 94.98 | 95.32 |
| Bra037401.1-P | Field mustard | nucleus | 94.62 | 88.59 |
| AT4G00940.2 | Thale cress | nucleus | 75.99 | 72.11 |
| CDY70840 | Canola | nucleus | 20.07 | 49.56 |
| KRH53547 | Soybean | nucleus | 28.32 | 38.35 |
| VIT_16s0098g01420.t01 | Wine grape | nucleus | 36.56 | 35.54 |
| KRH64383 | Soybean | nucleus | 35.84 | 33.67 |
| CDX71704 | Canola | nucleus | 37.63 | 31.34 |
| CDX86775 | Canola | nucleus | 34.77 | 31.19 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 32.62 | 31.16 |
| Solyc08g082910.1.1 | Tomato | nucleus | 35.48 | 31.13 |
| CDY64622 | Canola | nucleus | 35.84 | 30.96 |
| PGSC0003DMT400031928 | Potato | nucleus | 36.2 | 30.42 |
| CDY57876 | Canola | nucleus | 37.63 | 29.09 |
| CDY27314 | Canola | nucleus | 37.28 | 28.89 |
| CDX89134 | Canola | extracellular, vacuole | 35.84 | 28.74 |
| CDY61727 | Canola | nucleus | 38.35 | 28.61 |
| CDY41539 | Canola | nucleus | 36.92 | 28.14 |
| CDX95706 | Canola | nucleus | 36.92 | 27.91 |
| CDX83357 | Canola | nucleus | 37.28 | 27.81 |
| CDX80030 | Canola | nucleus | 36.2 | 27.75 |
| CDY72657 | Canola | nucleus | 29.03 | 27.74 |
| CDY29082 | Canola | nucleus | 23.3 | 27.08 |
| CDY53379 | Canola | nucleus | 21.15 | 26.94 |
| CDY71684 | Canola | nucleus | 32.26 | 26.87 |
| CDY31568 | Canola | nucleus | 24.73 | 26.74 |
| CDX90602 | Canola | nucleus | 22.94 | 26.56 |
| CDY08775 | Canola | nucleus | 18.64 | 26.53 |
| CDX80191 | Canola | nucleus | 24.37 | 26.46 |
| CDX92613 | Canola | nucleus | 32.26 | 26.24 |
| CDY71763 | Canola | nucleus | 32.26 | 26.24 |
| CDX71050 | Canola | nucleus | 23.66 | 26.09 |
| CDY08392 | Canola | nucleus | 31.54 | 26.04 |
| CDY35454 | Canola | nucleus | 31.9 | 26.02 |
| CDY09221 | Canola | nucleus | 24.01 | 25.97 |
| CDY03494 | Canola | nucleus | 31.9 | 25.87 |
| CDY07781 | Canola | nucleus | 19.71 | 25.7 |
| CDX87189 | Canola | nucleus | 22.94 | 25.6 |
| CDY59600 | Canola | nucleus | 22.22 | 25.41 |
| CDX78095 | Canola | nucleus | 21.86 | 25.21 |
| CDY16836 | Canola | nucleus | 22.58 | 23.6 |
| CDX88742 | Canola | nucleus | 23.3 | 23.47 |
| CDX77184 | Canola | nucleus | 21.51 | 23.44 |
| CDY50231 | Canola | nucleus | 20.07 | 22.13 |
| CDY02191 | Canola | nucleus | 23.3 | 22.11 |
| CDY16754 | Canola | nucleus | 26.88 | 22.06 |
| CDY04620 | Canola | nucleus | 20.07 | 22.05 |
| CDY42836 | Canola | nucleus | 22.58 | 22.03 |
| CDY00341 | Canola | nucleus | 29.03 | 22.01 |
| CDX87270 | Canola | nucleus | 26.88 | 21.99 |
| CDY40813 | Canola | nucleus | 22.22 | 21.91 |
| CDY70666 | Canola | nucleus | 23.3 | 21.89 |
| CDY72049 | Canola | nucleus | 22.94 | 21.55 |
| CDY00373 | Canola | nucleus | 19.71 | 21.15 |
| CDX84369 | Canola | nucleus | 27.96 | 21.02 |
| CDY61064 | Canola | nucleus | 19.35 | 20.69 |
| CDY35729 | Canola | nucleus | 21.86 | 20.4 |
| CDY33948 | Canola | nucleus | 21.86 | 20.2 |
| CDY37834 | Canola | nucleus | 21.86 | 20.07 |
| CDY69145 | Canola | nucleus, plastid | 22.58 | 20.0 |
| CDY24798 | Canola | nucleus | 32.26 | 19.87 |
| CDX73385 | Canola | nucleus | 21.51 | 19.87 |
| CDX79743 | Canola | nucleus | 20.79 | 19.8 |
| CDX90142 | Canola | nucleus | 22.22 | 19.62 |
| CDY70838 | Canola | nucleus | 21.51 | 19.61 |
| CDY66590 | Canola | nucleus | 22.58 | 19.27 |
| CDY15678 | Canola | nucleus | 22.58 | 19.27 |
| CDY70312 | Canola | nucleus | 19.35 | 19.01 |
| CDY15624 | Canola | nucleus | 22.58 | 18.86 |
| CDX81292 | Canola | nucleus | 19.0 | 18.79 |
| CDY65260 | Canola | nucleus | 20.43 | 18.45 |
| CDX77212 | Canola | nucleus | 22.22 | 18.24 |
| CDX93365 | Canola | nucleus | 20.07 | 18.12 |
| CDY31735 | Canola | nucleus | 22.22 | 18.02 |
| CDY40358 | Canola | nucleus | 21.51 | 18.02 |
| CDX95139 | Canola | nucleus | 21.51 | 17.86 |
| CDX74947 | Canola | nucleus | 20.79 | 17.85 |
| CDX91370 | Canola | nucleus | 20.79 | 17.85 |
| CDY61965 | Canola | nucleus | 19.35 | 17.36 |
| CDY70704 | Canola | nucleus | 22.58 | 17.26 |
| CDY40213 | Canola | nucleus | 21.86 | 17.18 |
| CDX76102 | Canola | nucleus | 23.3 | 17.06 |
| CDY06274 | Canola | nucleus | 19.0 | 16.88 |
| CDY55549 | Canola | nucleus | 22.22 | 15.42 |
| CDX80822 | Canola | nucleus | 22.22 | 15.27 |
| CDY55422 | Canola | nucleus | 21.86 | 15.21 |
| CDY04855 | Canola | nucleus | 21.86 | 15.02 |
| CDY08776 | Canola | nucleus | 2.51 | 8.14 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078F195 | EnsemblPlants:CDY07156 | ProteinID:CDY07156 | ProteinID:CDY07156.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00123512001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF78 | UniParc:UPI0004EE2AC1 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaCnng01710D
Coordinates
chrLK031975:-:563307..565266
Molecular Weight (calculated)
31367.8 Da
IEP (calculated)
8.180
GRAVY (calculated)
-1.157
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHHHYTHHD HDQYQHHQMT ITNNNPYNTI ITTPPPSKQH RPQELRNCPR CNSSNTKFCY YNNYSLAQPR YLCKSCRRYW TEGGSLRNVP VGGGSRKNKK
101: LPLLQPNSSS SSPAKNLPDL NPPFAFTSSS STSTSSNPSK SAHRNNNDLS LSFSYPTMQE DKRAQGHYGH FTEQAMSGGQ NCLFAAPMGM IQFRQDYGHD
201: HNNTDIGFSL DSNKVDSNNQ NNLLVNGGGS KLMFSYGDRD EHHHDHERHD DGNKKRESGS SNELWSGIIL GGDSGGPTW
101: LPLLQPNSSS SSPAKNLPDL NPPFAFTSSS STSTSSNPSK SAHRNNNDLS LSFSYPTMQE DKRAQGHYGH FTEQAMSGGQ NCLFAAPMGM IQFRQDYGHD
201: HNNTDIGFSL DSNKVDSNNQ NNLLVNGGGS KLMFSYGDRD EHHHDHERHD DGNKKRESGS SNELWSGIIL GGDSGGPTW
001: MDHHQYHHHD QYQHQMMTST NNNSYNTIVT TQPPPTTTTM DSTTATTMIM DDEKKLMTTM STRPQEPRNC PRCNSSNTKF CYYNNYSLAQ PRYLCKSCRR
101: YWTEGGSLRN VPVGGGSRKN KKLPFPNSST SSSTKNLPDL NPPFVFTSSA SSSNPSKTHQ NNNDLSLSFS SPMQDKRAQG HYGHFSEQVV TGGQNCLFQA
201: PMGMIQFRQE YDHEHPKKNL GFSLDRNEEE IGNHDNFVVN EEGSKMMYPY GDHEDRQQHH HVRHDDGNKK REGGSSNELW SGIILGGDSG GPTW
101: YWTEGGSLRN VPVGGGSRKN KKLPFPNSST SSSTKNLPDL NPPFVFTSSA SSSNPSKTHQ NNNDLSLSFS SPMQDKRAQG HYGHFSEQVV TGGQNCLFQA
201: PMGMIQFRQE YDHEHPKKNL GFSLDRNEEE IGNHDNFVVN EEGSKMMYPY GDHEDRQQHH HVRHDDGNKK REGGSSNELW SGIILGGDSG GPTW
Arabidopsis Description
DOF4.1Dof zinc finger protein DOF4.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M161]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.