Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69145 | Canola | nucleus, plastid | 80.58 | 97.46 |
| Bra014752.1-P | Field mustard | nucleus | 87.4 | 95.14 |
| CDX73385 | Canola | nucleus | 64.57 | 81.46 |
| CDY40213 | Canola | nucleus | 71.13 | 76.34 |
| AT3G55370.3 | Thale cress | nucleus | 69.03 | 71.47 |
| CDY70840 | Canola | nucleus | 14.96 | 50.44 |
| CDY07781 | Canola | nucleus | 24.67 | 43.93 |
| VIT_13s0019g01410.t01 | Wine grape | nucleus | 38.58 | 43.62 |
| CDX93365 | Canola | nucleus | 30.18 | 37.22 |
| CDY65260 | Canola | nucleus | 29.92 | 36.89 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 23.88 | 36.84 |
| CDX74947 | Canola | nucleus | 31.23 | 36.62 |
| CDX91370 | Canola | nucleus | 30.97 | 36.31 |
| CDX79743 | Canola | nucleus | 27.82 | 36.18 |
| CDY40358 | Canola | nucleus | 30.97 | 35.44 |
| CDY70704 | Canola | nucleus | 33.33 | 34.79 |
| CDY55422 | Canola | nucleus | 35.96 | 34.16 |
| CDY04855 | Canola | nucleus | 36.22 | 33.99 |
| CDY15624 | Canola | nucleus | 29.4 | 33.53 |
| CDY55549 | Canola | nucleus | 34.91 | 33.08 |
| CDX80822 | Canola | nucleus | 34.91 | 32.76 |
| CDX95139 | Canola | nucleus | 28.35 | 32.14 |
| CDY06274 | Canola | nucleus | 26.25 | 31.85 |
| CDY61965 | Canola | nucleus | 25.98 | 31.83 |
| CDX77212 | Canola | nucleus | 28.35 | 31.76 |
| CDY31735 | Canola | nucleus | 28.61 | 31.69 |
| CDY08775 | Canola | nucleus | 15.49 | 30.1 |
| CDX87189 | Canola | nucleus | 17.85 | 27.2 |
| CDY16836 | Canola | nucleus | 18.9 | 26.97 |
| CDY70312 | Canola | nucleus | 19.95 | 26.76 |
| CDY40813 | Canola | nucleus | 19.16 | 25.8 |
| CDY72049 | Canola | nucleus | 19.95 | 25.59 |
| CDY70666 | Canola | nucleus | 19.95 | 25.59 |
| CDY53379 | Canola | nucleus | 14.7 | 25.57 |
| CDY29082 | Canola | nucleus | 16.01 | 25.42 |
| CDX80191 | Canola | nucleus | 17.06 | 25.29 |
| CDY31568 | Canola | nucleus | 17.06 | 25.19 |
| CDY42836 | Canola | nucleus | 18.9 | 25.17 |
| CDX90602 | Canola | nucleus | 15.75 | 24.9 |
| CDX78095 | Canola | nucleus | 15.75 | 24.79 |
| CDY72657 | Canola | nucleus | 18.9 | 24.66 |
| CDX81292 | Canola | nucleus | 18.11 | 24.47 |
| CDY09221 | Canola | nucleus | 16.54 | 24.42 |
| CDY66590 | Canola | nucleus | 20.73 | 24.16 |
| CDX71050 | Canola | nucleus | 16.01 | 24.11 |
| CDY15678 | Canola | nucleus | 20.47 | 23.85 |
| CDY33948 | Canola | nucleus | 18.9 | 23.84 |
| CDY02191 | Canola | nucleus | 18.37 | 23.81 |
| CDY59600 | Canola | nucleus | 15.22 | 23.77 |
| CDY51722 | Canola | nucleus | 17.32 | 23.74 |
| CDY37834 | Canola | nucleus | 18.9 | 23.68 |
| CDX80030 | Canola | nucleus | 22.57 | 23.63 |
| CDY03494 | Canola | nucleus | 21.26 | 23.55 |
| CDY70838 | Canola | nucleus | 18.9 | 23.53 |
| CDY07156 | Canola | nucleus | 17.06 | 23.3 |
| CDY71684 | Canola | nucleus | 20.47 | 23.28 |
| CDY41539 | Canola | nucleus | 22.31 | 23.22 |
| CDX88742 | Canola | nucleus | 16.8 | 23.1 |
| CDY35729 | Canola | nucleus | 18.11 | 23.08 |
| CDX77184 | Canola | nucleus | 15.49 | 23.05 |
| CDY71763 | Canola | nucleus | 20.73 | 23.03 |
| CDX92613 | Canola | nucleus | 20.73 | 23.03 |
| CDX95706 | Canola | nucleus | 21.78 | 22.49 |
| CDX90142 | Canola | nucleus | 18.64 | 22.47 |
| CDX83357 | Canola | nucleus | 22.05 | 22.46 |
| CDX71704 | Canola | nucleus | 19.42 | 22.09 |
| CDY35454 | Canola | nucleus | 19.68 | 21.93 |
| CDY61727 | Canola | nucleus | 21.52 | 21.93 |
| CDY27314 | Canola | nucleus | 20.47 | 21.67 |
| CDX86775 | Canola | nucleus | 17.59 | 21.54 |
| CDY16754 | Canola | nucleus | 19.16 | 21.47 |
| CDX87270 | Canola | nucleus | 19.16 | 21.41 |
| CDY64622 | Canola | nucleus | 18.11 | 21.36 |
| CDY08392 | Canola | nucleus | 18.9 | 21.3 |
| CDY00373 | Canola | nucleus | 14.44 | 21.15 |
| CDY57876 | Canola | nucleus | 19.95 | 21.05 |
| CDY50231 | Canola | nucleus | 13.91 | 20.95 |
| CDY61064 | Canola | nucleus | 14.17 | 20.69 |
| CDY04620 | Canola | nucleus | 13.65 | 20.47 |
| CDX89134 | Canola | extracellular, vacuole | 18.37 | 20.11 |
| CDY00341 | Canola | nucleus | 18.9 | 19.57 |
| CDX84369 | Canola | nucleus | 18.9 | 19.41 |
| CDY24798 | Canola | nucleus | 19.68 | 16.56 |
| CDY08776 | Canola | nucleus | 2.1 | 9.3 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078CH89 | EnsemblPlants:CDX76102 | ProteinID:CDX76102 | ProteinID:CDX76102.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00126371001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | TMHMM:TMhelix |
| UniParc:UPI0004EE7BD0 | InterPro:Znf_Dof | SEG:seg | : | : | : |
Description
BnaA04g03660D
Coordinates
chrLK031806:-:846027..848115
Molecular Weight (calculated)
42164.2 Da
IEP (calculated)
9.337
GRAVY (calculated)
-0.570
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFSSLPVNQ FDSHNWQQVM NLGYCICFLI RLYFAPNIIN LHIFSLYIFF CLRTTFQSQV VSLKSQGNTL QQDRVTSYQN PNFNLPQFSS PPASQAGSSQ
101: ARVNSMVERA RIAKIPLPEA ALKCPRCDST NTKFCYFNNY NLTQPRHFCK TCRRYWTRGG ALRNVPVGGG FRRNKRSKSN GGGRSKSTVV VSADNNNTSS
201: SLSSNPSYSN PSKFLSYGQA PGFTSNLPIL PPFQSHGGYN SSNIGLDFSG IQMSGMSSSG GMLDPWRMSS LQQSQQFPFL SNTSGLDQSS NALYPLLDGN
301: EGLRSKPLMD MEQPRNMKAE ENDQDLDKDG NGVNNLSRNF LGNININPSG NDEYTSWGGN SSINSSWTGF TSNNSTGHLS F
101: ARVNSMVERA RIAKIPLPEA ALKCPRCDST NTKFCYFNNY NLTQPRHFCK TCRRYWTRGG ALRNVPVGGG FRRNKRSKSN GGGRSKSTVV VSADNNNTSS
201: SLSSNPSYSN PSKFLSYGQA PGFTSNLPIL PPFQSHGGYN SSNIGLDFSG IQMSGMSSSG GMLDPWRMSS LQQSQQFPFL SNTSGLDQSS NALYPLLDGN
301: EGLRSKPLMD MEQPRNMKAE ENDQDLDKDG NGVNNLSRNF LGNININPSG NDEYTSWGGN SSINSSWTGF TSNNSTGHLS F
001: MVFSSLPVNQ FDSQNWQQMI SILVFFSTSR LFKKLFLVDK NLFSCLLQGL MYNVFLTGLI FSLQGNQHQL ECVTTDQNPN NYLRQLSSPP TSQVAGSSQA
101: RVNSMVERAR IAKVPLPEAA LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGS LRNVPVGGGF RRNKRSKSRS KSTVVVSTDN TTSTSSLTSR
201: PSYSNPSKFH SYGQIPEFNS NLPILPPLQS LGDYNSSNTG LDFGGTQISN MISGMSSSGG ILDAWRIPPS QQAQQFPFLI NTTGLVQSSN ALYPLLEGGV
301: SATQTRNVKA EENDQDRGRD GDGVNNLSRN FLGNININSG RNEEYTSWGG NSSWTGFTSN NSTGHLSF
101: RVNSMVERAR IAKVPLPEAA LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGS LRNVPVGGGF RRNKRSKSRS KSTVVVSTDN TTSTSSLTSR
201: PSYSNPSKFH SYGQIPEFNS NLPILPPLQS LGDYNSSNTG LDFGGTQISN MISGMSSSGG ILDAWRIPPS QQAQQFPFLI NTTGLVQSSN ALYPLLEGGV
301: SATQTRNVKA EENDQDRGRD GDGVNNLSRN FLGNININSG RNEEYTSWGG NSSWTGFTSN NSTGHLSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.