Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80030 | Canola | nucleus | 97.81 | 98.35 |
| AT2G46590.2 | Thale cress | nucleus | 87.98 | 87.26 |
| CDX95706 | Canola | nucleus | 87.7 | 86.99 |
| CDX83357 | Canola | nucleus | 88.25 | 86.36 |
| CDY61727 | Canola | nucleus | 87.43 | 85.56 |
| CDY27314 | Canola | nucleus | 83.06 | 84.44 |
| CDX71704 | Canola | nucleus | 61.48 | 67.16 |
| CDY64622 | Canola | nucleus | 56.28 | 63.78 |
| CDY70840 | Canola | nucleus | 19.67 | 63.72 |
| CDX86775 | Canola | nucleus | 54.1 | 63.67 |
| CDY57876 | Canola | nucleus | 61.2 | 62.05 |
| CDX89134 | Canola | extracellular, vacuole | 56.83 | 59.77 |
| KRG97209 | Soybean | nucleus | 34.15 | 49.6 |
| KRH68931 | Soybean | nucleus | 35.25 | 44.03 |
| CDY72657 | Canola | nucleus | 30.33 | 38.01 |
| CDY71684 | Canola | nucleus | 34.7 | 37.91 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 28.69 | 37.5 |
| CDY03494 | Canola | nucleus | 35.25 | 37.5 |
| CDY51722 | Canola | nucleus | 28.42 | 37.41 |
| CDY35454 | Canola | nucleus | 34.7 | 37.13 |
| CDX92613 | Canola | nucleus | 34.7 | 37.03 |
| CDY71763 | Canola | nucleus | 34.7 | 37.03 |
| CDY07156 | Canola | nucleus | 28.14 | 36.92 |
| CDY08392 | Canola | nucleus | 32.79 | 35.5 |
| Zm00001d017575_P001 | Maize | nucleus | 35.79 | 35.03 |
| Zm00001d051439_P001 | Maize | nucleus | 34.7 | 34.6 |
| Os02t0673700-01 | Rice | nucleus | 35.52 | 34.12 |
| Os04t0567800-01 | Rice | nucleus | 33.61 | 33.88 |
| TraesCS2B01G420400.1 | Wheat | nucleus | 34.43 | 33.51 |
| KXG26925 | Sorghum | nucleus | 35.52 | 33.51 |
| Zm00001d026096_P001 | Maize | nucleus, plastid | 32.51 | 33.43 |
| TraesCS2A01G402200.1 | Wheat | nucleus | 34.43 | 33.33 |
| TraesCS2D01G399500.1 | Wheat | nucleus | 34.43 | 33.33 |
| TraesCS6A01G255500.1 | Wheat | nucleus | 34.97 | 32.65 |
| TraesCS6D01G236700.1 | Wheat | nucleus | 34.7 | 32.48 |
| TraesCS6B01G270100.1 | Wheat | nucleus | 33.88 | 31.88 |
| CDY29082 | Canola | nucleus | 19.95 | 30.42 |
| CDX90602 | Canola | nucleus | 19.67 | 29.88 |
| CDY31568 | Canola | nucleus | 21.04 | 29.84 |
| CDY53379 | Canola | nucleus | 17.76 | 29.68 |
| CDX87189 | Canola | nucleus | 20.22 | 29.6 |
| CDX80191 | Canola | nucleus | 20.77 | 29.57 |
| CDY07781 | Canola | nucleus | 16.94 | 28.97 |
| CDY09221 | Canola | nucleus | 20.22 | 28.68 |
| CDX78095 | Canola | nucleus | 18.85 | 28.51 |
| CDY59600 | Canola | nucleus | 18.85 | 28.28 |
| KXG31020 | Sorghum | nucleus | 35.25 | 28.23 |
| CDY24798 | Canola | nucleus | 34.15 | 27.59 |
| CDY16754 | Canola | nucleus | 25.41 | 27.35 |
| Zm00001d002642_P001 | Maize | nucleus | 35.79 | 27.35 |
| CDY16836 | Canola | nucleus | 19.95 | 27.34 |
| CDX87270 | Canola | nucleus | 25.41 | 27.27 |
| CDX84369 | Canola | nucleus | 27.32 | 26.95 |
| CDY00341 | Canola | nucleus | 27.05 | 26.9 |
| HORVU6Hr1G065250.3 | Barley | nucleus | 34.15 | 26.6 |
| CDY08775 | Canola | nucleus | 14.21 | 26.53 |
| CDY40813 | Canola | nucleus | 20.49 | 26.5 |
| CDY69145 | Canola | nucleus, plastid | 22.68 | 26.35 |
| CDY02191 | Canola | nucleus | 21.04 | 26.19 |
| CDX77184 | Canola | nucleus | 18.31 | 26.17 |
| CDX71050 | Canola | nucleus | 18.03 | 26.09 |
| CDY42836 | Canola | nucleus | 19.95 | 25.52 |
| CDX73385 | Canola | nucleus | 21.04 | 25.5 |
| CDY70666 | Canola | nucleus | 20.49 | 25.25 |
| CDY72049 | Canola | nucleus | 20.22 | 24.92 |
| CDY35729 | Canola | nucleus | 20.22 | 24.75 |
| CDX88742 | Canola | nucleus | 18.58 | 24.55 |
| CDY50231 | Canola | nucleus | 16.67 | 24.11 |
| CDY04620 | Canola | nucleus | 16.67 | 24.02 |
| CDY65260 | Canola | nucleus | 20.22 | 23.95 |
| CDY00373 | Canola | nucleus | 16.94 | 23.85 |
| CDY61064 | Canola | nucleus | 16.94 | 23.75 |
| CDX90142 | Canola | nucleus | 20.49 | 23.73 |
| CDX93365 | Canola | nucleus | 19.95 | 23.62 |
| CDX79743 | Canola | nucleus | 18.85 | 23.55 |
| CDX74947 | Canola | nucleus | 20.77 | 23.38 |
| CDX91370 | Canola | nucleus | 20.22 | 22.77 |
| CDY66590 | Canola | nucleus | 20.22 | 22.63 |
| CDY15678 | Canola | nucleus | 19.95 | 22.32 |
| CDX76102 | Canola | nucleus | 23.22 | 22.31 |
| CDY40213 | Canola | nucleus | 21.04 | 21.69 |
| CDY40358 | Canola | nucleus | 19.67 | 21.62 |
| CDY15624 | Canola | nucleus | 19.67 | 21.56 |
| CDX95139 | Canola | nucleus | 19.4 | 21.13 |
| CDX77212 | Canola | nucleus | 19.4 | 20.88 |
| CDY70838 | Canola | nucleus | 17.21 | 20.59 |
| CDY70704 | Canola | nucleus | 20.49 | 20.55 |
| CDY31735 | Canola | nucleus | 19.13 | 20.35 |
| CDY70312 | Canola | nucleus | 15.57 | 20.07 |
| CDY37834 | Canola | nucleus | 16.67 | 20.07 |
| CDY33948 | Canola | nucleus | 16.39 | 19.87 |
| CDY61965 | Canola | nucleus | 16.67 | 19.61 |
| CDX81292 | Canola | nucleus | 15.03 | 19.5 |
| CDY06274 | Canola | nucleus | 16.67 | 19.43 |
| CDY04855 | Canola | nucleus | 21.31 | 19.21 |
| CDY55422 | Canola | nucleus | 21.04 | 19.2 |
| CDY55549 | Canola | nucleus | 21.04 | 19.15 |
| CDX80822 | Canola | nucleus | 21.04 | 18.97 |
| CDY08776 | Canola | nucleus | 2.46 | 10.47 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078HW10 | UniProt:A0A078HW10 | EnsemblPlants:CDY41539 | ProteinID:CDY41539 | ProteinID:CDY41539.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00073166001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF15 | UniParc:UPI0004EF170D | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g00830DBnaC04g00830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HW10]
Coordinates
chrLK032500:+:25927..27626
Molecular Weight (calculated)
40149.5 Da
IEP (calculated)
9.143
GRAVY (calculated)
-0.779
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATKWTQGF QEMMNIKPMD QIMIPNNNNT HQSTTTSSAR PSTILTPNGV SAAGATVSSV SNNNNNTAVV VERKARPQEK LNCPRCNSTN TKFCYYNNYS
101: LTQPRYFCKG CRRYWTEGGT LRNVPVGGSS RKNKRLSSSS SSSNILQTTP SSLGLTTTLP DLNPPILFSN QIPNKSIGSS QDLNLLSFPV MQDQHHRVHM
201: SQFLHMPKME GNGNITHQQP SSSSSLYGSS PVSALELLRR GVSVSPNSVM PSGPMMDSSN NVMYTSSGFP TMVDYKPSNL SFSTDHHQGT GHNNHNRSDD
301: AHHQGRVLFP FGDQMKELSS SITQEVDHDD NQQQKSHGNN NNNISSSPNN GYWSGMFSTT GGGSSW
101: LTQPRYFCKG CRRYWTEGGT LRNVPVGGSS RKNKRLSSSS SSSNILQTTP SSLGLTTTLP DLNPPILFSN QIPNKSIGSS QDLNLLSFPV MQDQHHRVHM
201: SQFLHMPKME GNGNITHQQP SSSSSLYGSS PVSALELLRR GVSVSPNSVM PSGPMMDSSN NVMYTSSGFP TMVDYKPSNL SFSTDHHQGT GHNNHNRSDD
301: AHHQGRVLFP FGDQMKELSS SITQEVDHDD NQQQKSHGNN NNNISSSPNN GYWSGMFSTT GGGSSW
001: MDATKWTQGF QEMMNVKPME QIMIPNNNTH QPNTTSNARP NTILTSNGVS TAGATVSGVS NNNNNTAVVA ERKARPQEKL NCPRCNSTNT KFCYYNNYSL
101: TQPRYFCKGC RRYWTEGGSL RNVPVGGSSR KNKRSSSSSS SNILQTIPSS LPDLNPPILF SNQIHNKSKG SSQDLNLLSF PVMQDQHHHH VHMSQFLQMP
201: KMEGNGNITH QQQPSSSSSV YGSSSSPVSA LELLRTGVNV SSRSGINSSF MPSGSMMDSN TVLYTSSGFP TMVDYKPSNL SFSTDHQGLG HNSNNRSEAL
301: HSDHHQQGRV LFPFGDQMKE LSSSITQEVD HDDNQQQKSH GNNNNNNNSS PNNGYWSGMF STTGGGSSW
101: TQPRYFCKGC RRYWTEGGSL RNVPVGGSSR KNKRSSSSSS SNILQTIPSS LPDLNPPILF SNQIHNKSKG SSQDLNLLSF PVMQDQHHHH VHMSQFLQMP
201: KMEGNGNITH QQQPSSSSSV YGSSSSPVSA LELLRTGVNV SSRSGINSSF MPSGSMMDSN TVLYTSSGFP TMVDYKPSNL SFSTDHQGLG HNSNNRSEAL
301: HSDHHQQGRV LFPFGDQMKE LSSSITQEVD HDDNQQQKSH GNNNNNNNSS PNNGYWSGMF STTGGGSSW
Arabidopsis Description
DOF2.5Dof zinc finger protein DOF2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.