Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002642_P001 | Maize | nucleus | 90.46 | 73.28 |
| TraesCS2D01G399500.1 | Wheat | nucleus | 66.49 | 68.25 |
| TraesCS2B01G420400.1 | Wheat | nucleus | 65.98 | 68.09 |
| TraesCS2A01G402200.1 | Wheat | nucleus | 66.24 | 67.99 |
| KXG31020 | Sorghum | nucleus | 62.63 | 53.17 |
| KRG97209 | Soybean | nucleus | 30.41 | 46.83 |
| KRH68931 | Soybean | nucleus | 32.22 | 42.66 |
| AT3G61850.4 | Thale cress | nucleus | 31.96 | 38.27 |
| Bra014418.1-P | Field mustard | nucleus | 29.9 | 37.42 |
| CDX86775 | Canola | nucleus | 29.9 | 37.3 |
| CDX71704 | Canola | nucleus | 31.96 | 37.01 |
| Bra004525.1-P | Field mustard | nucleus | 33.51 | 36.93 |
| AT2G46590.2 | Thale cress | nucleus | 34.79 | 36.59 |
| CDX80030 | Canola | nucleus | 33.76 | 35.99 |
| CDY64622 | Canola | nucleus | 29.64 | 35.6 |
| CDY41539 | Canola | nucleus | 33.51 | 35.52 |
| Bra039272.1-P | Field mustard | nucleus, plastid | 32.73 | 35.28 |
| CDY27314 | Canola | nucleus | 32.73 | 35.28 |
| Bra000429.1-P | Field mustard | nucleus | 33.25 | 34.96 |
| CDX95706 | Canola | nucleus | 33.25 | 34.96 |
| CDY57876 | Canola | nucleus | 32.47 | 34.9 |
| CDX83357 | Canola | nucleus | 33.25 | 34.49 |
| CDY61727 | Canola | nucleus | 32.99 | 34.22 |
| CDX89134 | Canola | extracellular, vacuole | 29.9 | 33.33 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 34.79 | 31.25 |
| EES05649 | Sorghum | nucleus | 22.16 | 29.15 |
| EES07840 | Sorghum | nucleus | 22.68 | 25.88 |
| OQU79380 | Sorghum | nucleus, vacuole | 22.42 | 25.59 |
| EES15496 | Sorghum | nucleus | 22.94 | 25.14 |
| EES03938 | Sorghum | nucleus | 20.62 | 23.88 |
| KXG30845 | Sorghum | nucleus | 18.56 | 23.68 |
| KXG39680 | Sorghum | nucleus | 22.68 | 22.34 |
| KXG37254 | Sorghum | nucleus | 23.97 | 21.38 |
| EES18302 | Sorghum | plastid | 19.59 | 20.77 |
| EER97271 | Sorghum | nucleus | 18.56 | 20.34 |
| KXG37485 | Sorghum | nucleus | 18.3 | 18.68 |
| EER91281 | Sorghum | nucleus | 18.3 | 18.44 |
| KXG21095 | Sorghum | nucleus | 17.01 | 17.14 |
Protein Annotations
| MapMan:15.5.1.5 | UniProt:A0A1B6PMP3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | EnsemblPlants:KXG26925 |
| ProteinID:KXG26925 | ProteinID:KXG26925.1 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF28 | EnsemblPlantsGene:SORBI_3006G182300 | UniParc:UPI00081AE6EA | InterPro:Znf_Dof | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:-:53721345..53723981
Molecular Weight (calculated)
38948.1 Da
IEP (calculated)
8.567
GRAVY (calculated)
-0.483
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMCSRSSSS SSTETHNPTR AQAAKGLGLV KPMEEMLMAA NAGAANPSQG SNNPNPPAPA PGGALRGGGA PAAPLAGAGS TERRARPQKE KALNCPRCNS
101: TNTKFCYYNN YSLQQPRYFC KTCRRYWTEG GSLRNVPVGG GSRKNKRSSS SASASASTSA SVTSSSMASA EGAAASKNPK LAHEGAHDLN LAFPHHGGLH
201: APEFAAFPSL ESSNVCNPGG GMTSNGRGGG AGPAVGALSA MELLRSSGCY MPLQMPMQMQ GDYTAAEFAL GDFRTPPPPP SQSVLGFSLD AHGPGSGAAA
301: AGYGSSAGLQ GVTENAGRLL FPFEDLKPPV SSGGGGVAGG ATGGAGDGNS NHNQFDHNKE QDGGGGPGAG HDTPGFWSGM IGGSGASW
101: TNTKFCYYNN YSLQQPRYFC KTCRRYWTEG GSLRNVPVGG GSRKNKRSSS SASASASTSA SVTSSSMASA EGAAASKNPK LAHEGAHDLN LAFPHHGGLH
201: APEFAAFPSL ESSNVCNPGG GMTSNGRGGG AGPAVGALSA MELLRSSGCY MPLQMPMQMQ GDYTAAEFAL GDFRTPPPPP SQSVLGFSLD AHGPGSGAAA
301: AGYGSSAGLQ GVTENAGRLL FPFEDLKPPV SSGGGGVAGG ATGGAGDGNS NHNQFDHNKE QDGGGGPGAG HDTPGFWSGM IGGSGASW
001: MDTAQWPQEI VVKPLEEIVT NTCPKPQPQP LQPQQPPSVG GERKARPEKD QAVNCPRCNS TNTKFCYYNN YSLTQPRYFC KGCRRYWTEG GSLRNIPVGG
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
Arabidopsis Description
DOF4.6Dof zinc finger protein DOF4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.