CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028625_P002	Maize	nucleus	86.29	87.86
KXG37254	Sorghum	nucleus	40.36	36.55
OQU79380	Sorghum	nucleus, vacuole	29.7	34.41
KRH01640	Soybean	nucleus	31.47	34.16
KXG21095	Sorghum	nucleus	30.46	31.17
EES05649	Sorghum	nucleus	20.3	27.12
EER97271	Sorghum	nucleus	23.35	25.99
KXG30845	Sorghum	nucleus	18.53	24.01
EER91281	Sorghum	nucleus	22.59	23.12
KXG26925	Sorghum	nucleus	22.34	22.68
EES07840	Sorghum	nucleus	18.53	21.47
EES15496	Sorghum	nucleus	19.04	21.19
KXG31020	Sorghum	nucleus	23.86	20.57
EES03938	Sorghum	nucleus	16.75	19.7
EES18302	Sorghum	plastid	17.77	19.13
KXG37485	Sorghum	nucleus	15.99	16.58

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A1B6QP24	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	EnsemblPlants:KXG39680
ProteinID:KXG39680	ProteinID:KXG39680.1	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF65	EnsemblPlantsGene:SORBI_3001G420300	UniParc:UPI00081ABD31	InterPro:Znf_Dof	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:70085136..70088029

Molecular Weight (calculated)

40288.1 Da

IEP (calculated)

10.363

GRAVY (calculated)

-0.487

Length

394 amino acids

Sequence
(BLAST)

001: MVFPSPSVPV YLDPHPPNWN NQQQGQQPRA SGGADAPLLP VGPAAATAAA PEPSGLPRSS SAASAAVAAH ARPNSMAERA RLARMPQPEP ALKCPRCEST
101: NTKFCYYNNY SLSQPRHFCK TCRRYWTRGG SLRNVPVGGG CRRNKRSSKS SSAAAAGSSS SSKTSSSGRL LGGPSATPST TPGVTGAIIT PGLSSFSHHH
201: LPFLGSMHPP GPNLGLAFSA GLPLLGMQHL DTVDQFPVAS GGGTTIGASL EQWRVQQQQQ RQFPFMTGGI LDLPQPPTYQ LGLEANRGGG GGSAAAAFTL
301: GQPTTTSATA TTGRQEGSPK KMEDSKGQDM SLQRQYMAAL RHGSGAHGGW DGNAAGGSGS DGGGTGSAGS TWPMNIIPGF HSSSTTGGNG GGSL

Best Arabidopsis Sequence Match ( AT3G55370.3 )
(BLAST)

001: MVFSSLPVNQ FDSQNWQQMI SILVFFSTSR LFKKLFLVDK NLFSCLLQGL MYNVFLTGLI FSLQGNQHQL ECVTTDQNPN NYLRQLSSPP TSQVAGSSQA
101: RVNSMVERAR IAKVPLPEAA LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGS LRNVPVGGGF RRNKRSKSRS KSTVVVSTDN TTSTSSLTSR
201: PSYSNPSKFH SYGQIPEFNS NLPILPPLQS LGDYNSSNTG LDFGGTQISN MISGMSSSGG ILDAWRIPPS QQAQQFPFLI NTTGLVQSSN ALYPLLEGGV
301: SATQTRNVKA EENDQDRGRD GDGVNNLSRN FLGNININSG RNEEYTSWGG NSSWTGFTSN NSTGHLSF

Arabidopsis Description

OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.