Factsheet for Zm00001d028625_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG39680	Sorghum	nucleus	87.86	86.29
Zm00001d047802_P001	Maize	nucleus	81.65	81.44
Zm00001d034653_P001	Maize	nucleus	24.81	42.86
Zm00001d034651_P002	Maize	nucleus	39.28	36.8
Zm00001d030727_P002	Maize	nucleus	30.23	34.31
KRH01640	Soybean	nucleus	31.78	33.88
Zm00001d041549_P001	Maize	nucleus	29.97	33.82
Zm00001d011058_P001	Maize	nucleus	26.87	30.77
Zm00001d035651_P001	Maize	nucleus	28.94	30.68
Zm00001d051700_P001	Maize	mitochondrion	18.09	27.67
Zm00001d017788_P001	Maize	nucleus	20.41	27.43
Zm00001d051577_P001	Maize	nucleus	20.16	26.26
Zm00001d017900_P001	Maize	nucleus	19.9	25.67
Zm00001d051439_P001	Maize	nucleus	24.03	25.34
Zm00001d017575_P001	Maize	nucleus	23.51	24.33
Zm00001d012963_P001	Maize	plastid, vacuole	39.28	24.2
Zm00001d021591_P001	Maize	nucleus	21.96	23.61
Zm00001d026096_P001	Maize	nucleus, plastid	21.71	23.6
Zm00001d013783_P001	Maize	nucleus	17.57	23.37
Zm00001d029512_P001	Maize	nucleus	21.19	23.36
Zm00001d033093_P001	Maize	nucleus	20.93	22.5
Zm00001d006463_P001	Maize	plastid	20.16	22.22
Zm00001d038281_P001	Maize	mitochondrion, nucleus	18.09	21.41
Zm00001d042736_P001	Maize	nucleus	17.57	20.92
Zm00001d012280_P001	Maize	nucleus	17.83	20.41
Zm00001d002642_P001	Maize	nucleus	23.26	18.79
Zm00001d034163_P001	Maize	nucleus	16.02	17.17
Zm00001d013200_P001	Maize	nucleus, plastid	16.28	17.07

Protein Annotations

EntrezGene:100501071	MapMan:15.5.1.5	UniProt:A0A1D6JY60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851
ProteinID:ONL96600.1	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992
PANTHER:PTHR31992:SF65	UniParc:UPI000221EA17	EnsemblPlantsGene:Zm00001d028625	EnsemblPlants:Zm00001d028625_P002	EnsemblPlants:Zm00001d028625_T002	InterPro:Znf_Dof
SEG:seg	:	:	:	:	:

Description

C2C2-Dof-transcription factor 30DOF30 transcription factor

Coordinates

chr1:-:41269098..41270850

Molecular Weight (calculated)

40126.9 Da

IEP (calculated)

10.218

GRAVY (calculated)

-0.556

Length

387 amino acids

Sequence
(BLAST)

001: MVFPSPSVQV YLDPHPPNWN NQQQQGQQPR ANGGADAPLL PLGPAAATSA APEQGGLPRS SSMANAAVAA HARPNSMAER ARLARMPHPE PALKCPRCES
101: TNTKFCYYNN YSLSQPRHFC KTCRRYWTRG GSLRNVPVGG GCRRNKRSSK SSSSSAGSSS SKMSPSGRLL GGPSATPSTT PGTTGAIITP GLSSFSHHLP
201: FLGSMHPSGP NLGLAFSAGL PLVGMQHLDT VDQFPVASGG GTTIGASLEQ WRVRQQQQQF PFMTGGILDL SQPPTYQFGL EANRGGSGSA AVAFNSGQTT
301: TTSATTGRQE GSSKKMGDSK GEDMSLQKQY MVPLRHGSGS HGVWDGSAGG TGSNGGGTGN GGSSWPMNMI PGFHSSSTSG CNDSGLS

Best Arabidopsis Sequence Match ( AT3G55370.1 )
(BLAST)

001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF

Arabidopsis Description

OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.