Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03938 | Sorghum | nucleus | 92.0 | 89.25 |
| Os01t0865800-00 | Rice | nucleus | 80.92 | 79.94 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 74.46 | 73.11 |
| TraesCS3A01G377000.1 | Wheat | nucleus | 74.46 | 73.11 |
| Zm00001d012280_P001 | Maize | nucleus | 76.0 | 73.08 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 74.15 | 72.81 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 74.15 | 72.81 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 50.77 | 50.46 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 22.77 | 29.6 |
| Zm00001d051700_P001 | Maize | mitochondrion | 21.23 | 27.27 |
| Zm00001d034653_P001 | Maize | nucleus | 18.77 | 27.23 |
| Bra017906.1-P | Field mustard | nucleus | 20.0 | 25.69 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 22.15 | 25.62 |
| CDY04620 | Canola | nucleus | 20.0 | 25.59 |
| CDY50231 | Canola | nucleus | 19.69 | 25.3 |
| CDY00373 | Canola | nucleus | 20.0 | 25.0 |
| CDY61064 | Canola | nucleus | 19.69 | 24.52 |
| Bra012277.1-P | Field mustard | nucleus | 19.69 | 24.52 |
| AT1G21340.1 | Thale cress | nucleus | 19.08 | 23.85 |
| KRH53419 | Soybean | nucleus | 20.92 | 23.53 |
| KRH64521 | Soybean | nucleus | 20.62 | 23.18 |
| PGSC0003DMT400002060 | Potato | nucleus | 18.77 | 22.93 |
| Solyc04g070960.1.1 | Tomato | nucleus | 18.77 | 22.85 |
| Zm00001d051577_P001 | Maize | nucleus | 20.0 | 21.89 |
| Zm00001d017788_P001 | Maize | nucleus | 19.38 | 21.88 |
| Zm00001d026096_P001 | Maize | nucleus, plastid | 23.08 | 21.07 |
| Zm00001d017900_P001 | Maize | nucleus | 19.38 | 21.0 |
| Zm00001d051439_P001 | Maize | nucleus | 23.08 | 20.44 |
| Zm00001d011058_P001 | Maize | nucleus | 20.31 | 19.53 |
| Zm00001d017575_P001 | Maize | nucleus | 22.15 | 19.25 |
| Zm00001d013783_P001 | Maize | nucleus | 17.23 | 19.24 |
| Zm00001d041549_P001 | Maize | nucleus | 20.31 | 19.24 |
| Zm00001d030727_P002 | Maize | nucleus | 20.0 | 19.06 |
| Zm00001d034163_P001 | Maize | nucleus | 20.92 | 18.84 |
| Zm00001d033093_P001 | Maize | nucleus | 20.62 | 18.61 |
| Zm00001d029512_P001 | Maize | nucleus | 20.0 | 18.52 |
| Zm00001d013200_P001 | Maize | nucleus, plastid | 20.31 | 17.89 |
| Zm00001d035651_P001 | Maize | nucleus | 20.0 | 17.81 |
| Zm00001d047802_P001 | Maize | nucleus | 21.23 | 17.78 |
| Zm00001d034651_P002 | Maize | nucleus | 22.46 | 17.68 |
| Zm00001d028625_P002 | Maize | nucleus | 20.92 | 17.57 |
| Zm00001d021591_P001 | Maize | nucleus | 18.46 | 16.67 |
| Zm00001d006463_P001 | Maize | plastid | 17.23 | 15.95 |
| Zm00001d002642_P001 | Maize | nucleus | 22.77 | 15.45 |
| Zm00001d012963_P001 | Maize | plastid, vacuole | 23.08 | 11.94 |
Protein Annotations
| MapMan:15.5.1.5 | UniProt:A0A1D6N6H6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | ProteinID:ONM36200.1 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF39 |
| UniParc:UPI0008454567 | EnsemblPlantsGene:Zm00001d042736 | EnsemblPlants:Zm00001d042736_P001 | EnsemblPlants:Zm00001d042736_T001 | InterPro:Znf_Dof | SEG:seg |
Description
C2C2-Dof-transcription factor 19Dof zinc finger protein DOF1.2
Coordinates
chr3:+:178528531..178529508
Molecular Weight (calculated)
33980.5 Da
IEP (calculated)
4.448
GRAVY (calculated)
-0.307
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPYAPGPPP SLLLDRRSYK QGGEAAPSCP RCDSPNTKFC YYNNYSLSQP RYFCKGCRRY WTKGGSLRNV PVGGGCRKNR RGKSSLRSAA DSIASGGGGR
101: DAAFGHRFPG PVRPDLVLEG MVGNHPSNPA GQAAMPGGVP AAADGSTIDL AMLYAKFLNH PPAEEGVGAV TPPESAGQVD EAFGASSDLM SPGALAPVQF
201: DPCQDGFGEW SGVPVSSAGP SSTASTTAAT TMLCTDVSVQ AAFGELNFAM DQNCFDSLGL PTDDVGNLSS SWCSIVPGLS TLEDAKYDLD SFPDDALSLH
301: DEGMISGTDH DWSVDCQGLE TLYMP
101: DAAFGHRFPG PVRPDLVLEG MVGNHPSNPA GQAAMPGGVP AAADGSTIDL AMLYAKFLNH PPAEEGVGAV TPPESAGQVD EAFGASSDLM SPGALAPVQF
201: DPCQDGFGEW SGVPVSSAGP SSTASTTAAT TMLCTDVSVQ AAFGELNFAM DQNCFDSLGL PTDDVGNLSS SWCSIVPGLS TLEDAKYDLD SFPDDALSLH
301: DEGMISGTDH DWSVDCQGLE TLYMP
001: MERAEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKSRRP KSSSGNNTKT SLTANSGNPG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.