Factsheet for Zm00001d034651_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034653_P001	Maize	nucleus	43.1	79.46
HORVU5Hr1G113220.6	Barley	nucleus	64.89	59.56
TraesCS5D01G493000.1	Wheat	nucleus	64.65	58.68
TraesCS5A01G479400.1	Wheat	nucleus	65.62	58.03
TraesCS5B01G492600.1	Wheat	nucleus	63.44	57.96
Zm00001d012963_P001	Maize	plastid, vacuole	76.76	50.48
CDY07781	Canola	nucleus	26.15	50.47
VIT_08s0007g00180.t01	Wine grape	nucleus	40.44	48.41
GSMUA_Achr6P33410_001	Banana	nucleus	28.81	48.18
Bra000008.1-P	Field mustard	nucleus	30.75	43.34
Solyc10g086440.1.1	Tomato	nucleus	37.29	42.54
Bra005181.1-P	Field mustard	nucleus	33.17	42.15
CDX79743	Canola	nucleus	29.78	41.98
CDX74947	Canola	nucleus	32.93	41.85
CDX91370	Canola	nucleus	32.69	41.54
CDX93365	Canola	nucleus	30.99	41.42
PGSC0003DMT400049288	Potato	nucleus	37.29	41.18
CDY65260	Canola	nucleus	30.75	41.1
HORVU5Hr1G113190.2	Barley	nucleus, plastid	28.33	40.91
Bra017171.1-P	Field mustard	nucleus	30.51	40.78
AT2G37590.1	Thale cress	nucleus	32.2	40.3
Zm00001d028625_P002	Maize	nucleus	36.8	39.28
Zm00001d047802_P001	Maize	nucleus	36.8	39.18
Zm00001d030727_P002	Maize	nucleus	29.06	35.19
Zm00001d041549_P001	Maize	nucleus	29.06	34.99
Zm00001d011058_P001	Maize	nucleus	28.09	34.32
Zm00001d035651_P001	Maize	nucleus	30.27	34.25
Zm00001d051700_P001	Maize	mitochondrion	17.19	28.06
Zm00001d017788_P001	Maize	nucleus	18.4	26.39
Zm00001d013783_P001	Maize	nucleus	18.4	26.12
Zm00001d051577_P001	Maize	nucleus	18.16	25.25
Zm00001d017900_P001	Maize	nucleus	17.68	24.33
Zm00001d021591_P001	Maize	nucleus	21.07	24.17
Zm00001d033093_P001	Maize	nucleus	20.82	23.89
Zm00001d051439_P001	Maize	nucleus	21.07	23.71
Zm00001d026096_P001	Maize	nucleus, plastid	20.1	23.31
Zm00001d017575_P001	Maize	nucleus	21.07	23.26
Zm00001d006463_P001	Maize	plastid	19.13	22.51
Zm00001d042736_P001	Maize	nucleus	17.68	22.46
Zm00001d012280_P001	Maize	nucleus	17.19	21.01
Zm00001d038281_P001	Maize	mitochondrion, nucleus	16.46	20.8
Zm00001d029512_P001	Maize	nucleus	17.43	20.51
Zm00001d034163_P001	Maize	nucleus	16.46	18.84
Zm00001d013200_P001	Maize	nucleus, plastid	16.71	18.7
Zm00001d002642_P001	Maize	nucleus	21.07	18.16

Protein Annotations

EntrezGene:100275540	MapMan:15.5.1.5	UniProt:B6SV34	EMBL:BT067417	EMBL:EU956599	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	GO:GO:0044212	InterPro:IPR003851	ProteinID:ONM10939.1	ProteinID:ONM10940.1
PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF66
UniParc:UPI000182B384	EnsemblPlantsGene:Zm00001d034651	EnsemblPlants:Zm00001d034651_P002	EnsemblPlants:Zm00001d034651_T002	InterPro:Znf_Dof	SEG:seg

Description

C2C2-Dof-transcription factor 27Dof zinc finger protein DOF3.6

Coordinates

chr1:+:298855809..298858616

Molecular Weight (calculated)

42088.0 Da

IEP (calculated)

9.027

GRAVY (calculated)

-0.489

Length

413 amino acids

Sequence
(BLAST)

001: MVFSSVPVYL DPPNWNQHQH QPQHEQLQAH HGQLPSDAGG GGGGGVDVHA HHHQLPPMPP SAPGGALMAP RRDMAAVVAA SGGSTSGGGG PTGGGSPIRP
101: GSMTERARLA KIPQPEPGLK CPRCESTNTK FCYFNNYSLS QPRHFCKTCR RYWTRGGTLR NVPVGGGCRR NKRTKSSKSN SSSAASASSA GGTSSSTSST
201: ATGGSGSAAS IMPPHQGHGG QPQFLASLHH PLVGGDHYST GASRLGFPGL SSLDPMDYHQ FGAGAGGAIG LEQWRLPQIQ QFPFLSSRPD AVQPPMSGIY
301: PFEVEGHGGE GSGFAGHMLG DPKVSGSAGL ITQLASVKME DNPTSAAMAS SSPREFLGLP RNLQLWGASG NGGASGNNGG GTGNAAGGGD TIPPGSSWVD
401: LSGFNSSSSG NVL

Best Arabidopsis Sequence Match ( AT3G55370.2 )
(BLAST)

001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF

Arabidopsis Description

OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.