Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G492600.1 | Wheat | nucleus | 96.48 | 97.12 |
| HORVU5Hr1G113220.6 | Barley | nucleus | 93.41 | 94.44 |
| TraesCS5A01G479400.1 | Wheat | nucleus | 96.48 | 94.0 |
| Os03t0821200-00 | Rice | nucleus | 62.64 | 68.84 |
| KXG37254 | Sorghum | nucleus | 64.4 | 67.36 |
| Zm00001d034651_P002 | Maize | nucleus | 58.68 | 64.65 |
| CDY07781 | Canola | nucleus | 23.52 | 50.0 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 26.15 | 48.18 |
| VIT_08s0007g00180.t01 | Wine grape | nucleus | 35.16 | 46.38 |
| Bra000008.1-P | Field mustard | nucleus | 26.81 | 41.64 |
| AT2G37590.1 | Thale cress | nucleus | 29.89 | 41.21 |
| CDX93365 | Canola | nucleus | 27.69 | 40.78 |
| Bra005181.1-P | Field mustard | nucleus | 28.79 | 40.31 |
| CDX79743 | Canola | nucleus | 25.93 | 40.27 |
| CDY65260 | Canola | nucleus | 27.25 | 40.13 |
| Solyc10g086440.1.1 | Tomato | nucleus | 31.87 | 40.06 |
| CDX74947 | Canola | nucleus | 28.57 | 40.0 |
| Bra017171.1-P | Field mustard | nucleus | 27.03 | 39.81 |
| CDX91370 | Canola | nucleus | 28.35 | 39.69 |
| PGSC0003DMT400049288 | Potato | nucleus | 32.09 | 39.04 |
| TraesCS4D01G207600.1 | Wheat | nucleus | 30.55 | 36.48 |
| TraesCS5D01G093800.2 | Wheat | nucleus | 27.25 | 35.94 |
| TraesCS3D01G537400.1 | Wheat | nucleus | 26.15 | 31.65 |
| TraesCS1D01G036700.2 | Wheat | nucleus | 25.05 | 31.15 |
| TraesCS3D01G537500.1 | Wheat | nucleus | 23.74 | 28.27 |
| TraesCS2D01G231600.1 | Wheat | nucleus | 19.56 | 25.0 |
| TraesCS2D01G076600.1 | Wheat | nucleus | 17.36 | 24.09 |
| TraesCS2D01G399500.1 | Wheat | nucleus | 19.56 | 23.55 |
| TraesCS6D01G254200.1 | Wheat | nucleus | 15.82 | 23.53 |
| TraesCS6D01G236700.1 | Wheat | nucleus | 20.0 | 23.27 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 14.73 | 23.1 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 15.38 | 21.15 |
| TraesCS7D01G215300.1 | Wheat | nucleus | 12.97 | 20.77 |
| TraesCS5D01G412000.1 | Wheat | nucleus | 15.16 | 18.16 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 14.73 | 17.77 |
| TraesCS5D01G161000.1 | Wheat | nucleus | 13.19 | 17.54 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G493000.1 | EnsemblPlantsGene:TraesCS5D01G493000 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | ncoils:Coil | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | PFAM:PD007478 |
| PFAM:PF02701 | PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : |
Description
No Description!
Coordinates
chr5D:+:525957286..525958907
Molecular Weight (calculated)
46477.0 Da
IEP (calculated)
9.420
GRAVY (calculated)
-0.594
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSVPLYH DPPNWNQNHS QQQQQQQQQL QQQQQLSHHG QMFASGGGGG GMEMHHHHQQ QQHQQYQQQQ HHHQLRPPVP PSGALMAPRP DGMGSAVALS
101: GAGGGGAGAG AGGGPTGGAV VRPGSMTDKA RMAKIPQPEP GLKCPRCEST NTKFCYFNNY SLTQPRHFCK TCRRYWTRGG TLRNVPVGGG CRRNKRTKSS
201: KSSSSAASAS GGGGTSSSTT SSTTTAGGGN GNGSSAAAAA GAMMSSQGQG HAQMPFFGSL HPLGAGSGDH YGTGASRLGF PGLINSLDPV DYQLGGGGAA
301: AAAMGLSEQW RLPQMQQFPF FGRADGMHQQ QQQMAGLYQF DATDASGFAG EMMGGVGGSK QLVPGSAGLI TQLASVKMED NPPSNNAMAG AASAREFLGL
401: PGNIQFWGGG NNGAGGNENG GSHSSGTVAP GGAGGGGGWV DQLPGFNSSS SGNIL
101: GAGGGGAGAG AGGGPTGGAV VRPGSMTDKA RMAKIPQPEP GLKCPRCEST NTKFCYFNNY SLTQPRHFCK TCRRYWTRGG TLRNVPVGGG CRRNKRTKSS
201: KSSSSAASAS GGGGTSSSTT SSTTTAGGGN GNGSSAAAAA GAMMSSQGQG HAQMPFFGSL HPLGAGSGDH YGTGASRLGF PGLINSLDPV DYQLGGGGAA
301: AAAMGLSEQW RLPQMQQFPF FGRADGMHQQ QQQMAGLYQF DATDASGFAG EMMGGVGGSK QLVPGSAGLI TQLASVKMED NPPSNNAMAG AASAREFLGL
401: PGNIQFWGGG NNGAGGNENG GSHSSGTVAP GGAGGGGGWV DQLPGFNSSS SGNIL
001: MVFSSIQAYL DSSNWQQAPP SNYNHDGTGA SANGGHVLRP QLQPQQQPQQ QPHPNGSGGG GGGGGGSIRA GSMVDRARQA NVALPEAALK CPRCESTNTK
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
Arabidopsis Description
DOF2.4Dof zinc finger protein DOF2.4 [Source:UniProtKB/Swiss-Prot;Acc:O80928]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.