Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G287700.1 | Wheat | nucleus | 95.86 | 95.53 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 93.79 | 94.12 |
| Os02t0726300-01 | Rice | nucleus | 68.97 | 70.92 |
| Zm00001d051700_P001 | Maize | mitochondrion | 60.0 | 68.77 |
| Zm00001d017900_P001 | Maize | nucleus | 67.24 | 65.0 |
| KXG30845 | Sorghum | nucleus | 67.59 | 64.47 |
| TraesCS7D01G215300.1 | Wheat | nucleus | 46.21 | 47.18 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 23.79 | 35.38 |
| CDX87189 | Canola | nucleus | 23.45 | 27.2 |
| Bra035956.1-P | Field mustard | nucleus | 23.79 | 25.84 |
| CDY16836 | Canola | nucleus | 23.79 | 25.84 |
| CDY40813 | Canola | nucleus | 25.17 | 25.8 |
| KRH56758 | Soybean | nucleus | 25.86 | 25.68 |
| Bra029352.1-P | Field mustard | nucleus | 24.14 | 25.18 |
| CDY42836 | Canola | nucleus | 24.83 | 25.17 |
| Bra013003.1-P | Field mustard | nucleus | 25.52 | 25.17 |
| CDY02191 | Canola | nucleus | 25.52 | 25.17 |
| KRH54755 | Soybean | nucleus | 26.21 | 25.08 |
| AT5G60850.1 | Thale cress | nucleus | 26.55 | 25.08 |
| KRH03180 | Soybean | nucleus | 25.52 | 24.67 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 26.21 | 23.9 |
| PGSC0003DMT400010397 | Potato | nucleus | 25.86 | 23.51 |
| TraesCS5D01G412000.1 | Wheat | nucleus | 30.0 | 22.89 |
| KRH63162 | Soybean | nucleus | 24.83 | 21.11 |
| TraesCS6D01G254200.1 | Wheat | nucleus | 21.72 | 20.59 |
| TraesCS2D01G076600.1 | Wheat | nucleus | 22.76 | 20.12 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 22.41 | 19.64 |
| TraesCS6D01G236700.1 | Wheat | nucleus | 25.86 | 19.18 |
| TraesCS5D01G093800.2 | Wheat | nucleus | 22.41 | 18.84 |
| TraesCS2D01G399500.1 | Wheat | nucleus | 24.48 | 18.78 |
| TraesCS4D01G207600.1 | Wheat | nucleus | 23.79 | 18.11 |
| TraesCS1D01G036700.2 | Wheat | nucleus | 22.76 | 18.03 |
| TraesCS2D01G231600.1 | Wheat | nucleus | 21.72 | 17.7 |
| TraesCS5D01G161000.1 | Wheat | nucleus | 20.34 | 17.25 |
| TraesCS3D01G537500.1 | Wheat | nucleus | 22.07 | 16.75 |
| TraesCS3D01G537400.1 | Wheat | nucleus | 20.69 | 15.96 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 20.69 | 15.92 |
| TraesCS5D01G493000.1 | Wheat | nucleus | 23.1 | 14.73 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G268400.1 | EnsemblPlantsGene:TraesCS6D01G268400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF40 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr6D:-:378378715..378379587
Molecular Weight (calculated)
30213.9 Da
IEP (calculated)
5.973
GRAVY (calculated)
-0.417
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDFQSIPGL AGRLFGGAAA ADIRRVQGPA SRCGVFSQAA SAQPEAAVKC PRCESTNTKF CYYNNYNLSQ PRHFCKSCRR YWTKGGVLRN VPVGGGCRKA
101: KRSSSSASAP STPAATDAKS QRRASSSSSS RSNSGSGSAS PTANGEDTPT TTTDPPPATP SSNSNANAVS FASRMTNYPF AADVPPPAPI FADQAAALAS
201: LFAPPPPPPL PVFSFSAEPK MEEAIGSLLL PGQEPAQEPE EPTCTSTVAD MAPFMSLDAG IFELGDASPA DYWNGGSCWT DVQDPSVYLP
101: KRSSSSASAP STPAATDAKS QRRASSSSSS RSNSGSGSAS PTANGEDTPT TTTDPPPATP SSNSNANAVS FASRMTNYPF AADVPPPAPI FADQAAALAS
201: LFAPPPPPPL PVFSFSAEPK MEEAIGSLLL PGQEPAQEPE EPTCTSTVAD MAPFMSLDAG IFELGDASPA DYWNGGSCWT DVQDPSVYLP
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.