Factsheet for TraesCS3D01G537400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G532000.1	Wheat	nucleus	96.54	97.58
TraesCS3B01G608800.1	Wheat	nucleus	96.54	96.54
HORVU3Hr1G116220.1	Barley	nucleus, plastid	95.74	90.68
Os05t0112200-01	Rice	nucleus	40.96	53.1
TraesCS1D01G036700.2	Wheat	nucleus	48.4	49.73
Zm00001d035651_P001	Maize	nucleus	48.14	49.59
Zm00001d011058_P001	Maize	nucleus	43.35	48.22
KXG21095	Sorghum	nucleus	48.4	47.27
TraesCS3D01G537500.1	Wheat	nucleus	32.18	31.68
TraesCS5D01G093800.2	Wheat	nucleus	26.6	28.99
TraesCS4D01G207600.1	Wheat	nucleus	28.72	28.35
KRH46814	Soybean	nucleus	27.39	28.07
KRG99864	Soybean	nucleus	26.33	27.27
KRH70477	Soybean	nucleus	26.33	26.68
TraesCS5D01G493000.1	Wheat	nucleus	31.65	26.15
TraesCS7D01G215300.1	Wheat	nucleus	15.69	20.77
TraesCS6D01G268400.1	Wheat	nucleus	15.96	20.69
TraesCS2D01G076600.1	Wheat	nucleus	17.29	19.82
TraesCS2D01G231600.1	Wheat	nucleus	18.62	19.66
TraesCS6D01G254200.1	Wheat	nucleus	15.96	19.61
TraesCS3D01G370100.1	Wheat	nucleus	15.69	17.82
TraesCS2D01G399500.1	Wheat	nucleus	17.55	17.46
TraesCS1D01G274700.1	Wheat	mitochondrion	17.02	16.98
TraesCS5D01G412000.1	Wheat	nucleus	17.02	16.84
TraesCS6D01G236700.1	Wheat	nucleus	17.29	16.62
TraesCS5D01G161000.1	Wheat	nucleus	14.89	16.37

Protein Annotations

EnsemblPlants:TraesCS3D01G537400.1	EnsemblPlantsGene:TraesCS3D01G537400	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	InterPro:Znf_Dof	PANTHER:PTHR31992	PANTHER:PTHR31992:SF59	PFAM:PD007478	PFAM:PF02701
PFscan:PS50884	ScanProsite:PS01361	SEG:seg	MapMan:15.5.1.5	:	:

Description

No Description!

Coordinates

chr3D:+:610543535..610544993

Molecular Weight (calculated)

38636.2 Da

IEP (calculated)

8.312

GRAVY (calculated)

-0.716

Length

376 amino acids

Sequence
(BLAST)

001: MIFPPAFLDS SSCWNTNHNQ LQLQQIGSNT HVTTTPSPAG HGPGDGGGSN NNNHGQQEGL MATAGAGGGG GDGGGGGGGD GDSAGGGSNK PMSMSERARL
101: ARVPQPEPGL NCPRCDSTNT KFCYFNNYSL TQPRHFCRAC RRYWTRGGAL RNVPVGGGYR RHAKRSAKPK AGSAGSGTAA AGTSSATSTT PSTTACTTGT
201: ATAPPALQYS MFGSAPPHGS RFADSFDPAS LGLSFPARLL FPDSGAYAAD GGAQQHHHHH QGNGNGMEQW AAAQMQSFPF LHAMDHQMSG NQPPASAMPT
301: TMAAMQGMFH LGLQSGGGGG GNGDDGGNHQ FHHPPAKRDY QQQQDYPSSR GMYGDVVNGN GGGFNFYSST SNAAGN

Best Arabidopsis Sequence Match ( AT3G55370.3 )
(BLAST)

001: MVFSSLPVNQ FDSQNWQQMI SILVFFSTSR LFKKLFLVDK NLFSCLLQGL MYNVFLTGLI FSLQGNQHQL ECVTTDQNPN NYLRQLSSPP TSQVAGSSQA
101: RVNSMVERAR IAKVPLPEAA LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGS LRNVPVGGGF RRNKRSKSRS KSTVVVSTDN TTSTSSLTSR
201: PSYSNPSKFH SYGQIPEFNS NLPILPPLQS LGDYNSSNTG LDFGGTQISN MISGMSSSGG ILDAWRIPPS QQAQQFPFLI NTTGLVQSSN ALYPLLEGGV
301: SATQTRNVKA EENDQDRGRD GDGVNNLSRN FLGNININSG RNEEYTSWGG NSSWTGFTSN NSTGHLSF

Arabidopsis Description

OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.