Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G255500.1 | Wheat | nucleus | 97.19 | 96.94 |
| TraesCS6B01G270100.1 | Wheat | nucleus | 94.63 | 95.12 |
| HORVU6Hr1G065250.3 | Barley | nucleus | 94.12 | 78.3 |
| TraesCS2D01G399500.1 | Wheat | nucleus | 58.57 | 60.58 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 34.02 | 50.0 |
| AT3G61850.4 | Thale cress | nucleus | 32.99 | 39.81 |
| CDX71704 | Canola | nucleus | 32.74 | 38.21 |
| Bra014418.1-P | Field mustard | nucleus | 30.18 | 38.06 |
| CDX86775 | Canola | nucleus | 30.18 | 37.94 |
| CDY64622 | Canola | nucleus | 30.95 | 37.46 |
| CDX95706 | Canola | nucleus | 34.02 | 36.04 |
| Bra000429.1-P | Field mustard | nucleus | 34.02 | 36.04 |
| AT2G46590.2 | Thale cress | nucleus | 33.76 | 35.77 |
| CDX83357 | Canola | nucleus | 34.02 | 35.56 |
| CDY57876 | Canola | nucleus | 32.74 | 35.46 |
| CDX80030 | Canola | nucleus | 32.99 | 35.44 |
| Bra004525.1-P | Field mustard | nucleus | 31.71 | 35.23 |
| CDX89134 | Canola | extracellular, vacuole | 31.2 | 35.06 |
| CDY41539 | Canola | nucleus | 32.48 | 34.7 |
| CDY61727 | Canola | nucleus | 32.74 | 34.22 |
| Bra039272.1-P | Field mustard | nucleus, plastid | 31.46 | 34.17 |
| CDY27314 | Canola | nucleus | 31.46 | 34.17 |
| TraesCS6D01G254200.1 | Wheat | nucleus | 21.99 | 28.1 |
| TraesCS5D01G161000.1 | Wheat | nucleus | 23.53 | 26.9 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 19.18 | 25.86 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 20.46 | 24.17 |
| TraesCS5D01G093800.2 | Wheat | nucleus | 21.23 | 24.06 |
| TraesCS7D01G215300.1 | Wheat | nucleus | 17.39 | 23.94 |
| TraesCS4D01G207600.1 | Wheat | nucleus | 23.27 | 23.88 |
| TraesCS2D01G076600.1 | Wheat | nucleus | 18.93 | 22.56 |
| TraesCS5D01G493000.1 | Wheat | nucleus | 23.27 | 20.0 |
| TraesCS3D01G537500.1 | Wheat | nucleus | 19.44 | 19.9 |
| TraesCS1D01G036700.2 | Wheat | nucleus | 18.41 | 19.67 |
| TraesCS5D01G412000.1 | Wheat | nucleus | 18.93 | 19.47 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 18.67 | 19.36 |
| TraesCS2D01G231600.1 | Wheat | nucleus | 17.39 | 19.1 |
| TraesCS3D01G537400.1 | Wheat | nucleus | 16.62 | 17.29 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF28 |
| EnsemblPlantsGene:TraesCS6D01G236700 | EnsemblPlants:TraesCS6D01G236700.1 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6D:-:334226703..334228811
Molecular Weight (calculated)
40051.6 Da
IEP (calculated)
8.303
GRAVY (calculated)
-0.635
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAAQWHQGL GLVKPMEEMI MAGNPNPNPN PNGNPNPQPA PPSGAEAQRA PVPGPPAGGA GAAAGTGSTE RKAARPQKEK AINCPRCNST NTKFCYYNNY
101: SLQQPRYFCK TCRRYWTEGG SLRNVPVGGG SRKNKRSSSS VVSSAAGAVS TSGAASGTVP IGGMAAKNPK LMHEGAHDLN LAFPHHHGRV LHPSEFAAFP
201: SLESSSVCNP GGTMAANGAG GGRGMGAFSA MELLRSTGCY VPMPQVQLGM PPEYAAAGFA LGEFRMPLQH QQHHQQQQQQ QHQQHQQQVQ NMLGFSLDTG
301: GGGDAGGYGA GLQGAQESAT GRMLFPFEDL KPGTNAGGGG ASGGDQFEHS KDQGGGGGGG HETLGFWNNS MIGNGSSNDA GGGGGGGGGS W
101: SLQQPRYFCK TCRRYWTEGG SLRNVPVGGG SRKNKRSSSS VVSSAAGAVS TSGAASGTVP IGGMAAKNPK LMHEGAHDLN LAFPHHHGRV LHPSEFAAFP
201: SLESSSVCNP GGTMAANGAG GGRGMGAFSA MELLRSTGCY VPMPQVQLGM PPEYAAAGFA LGEFRMPLQH QQHHQQQQQQ QHQQHQQQVQ NMLGFSLDTG
301: GGGDAGGYGA GLQGAQESAT GRMLFPFEDL KPGTNAGGGG ASGGDQFEHS KDQGGGGGGG HETLGFWNNS MIGNGSSNDA GGGGGGGGGS W
001: MDATKWTQGF QEMINVKPME QMISSTNNNT PQQQPTFIAT NTRPNATASN GGSGGNTNNT ATMETRKARP QEKVNCPRCN STNTKFCYYN NYSLTQPRYF
101: CKGCRRYWTE GGSLRNVPVG GSSRKNKRSS TPLASPSNPK LPDLNPPILF SSQIPNKSNK DLNLLSFPVM QDHHHHGMSH FFHMPKIENN NTSSSIYASS
201: SPVSALELLR SNGVSSRGMN TFLPGQMMDS NSVLYSSLGF PTMPDYKQSN NNLSFSIDHH QGIGHNTINS NQRAQDNNDD MNGASRVLFP FSDMKELSST
301: TQEKSHGNNT YWNGMFSNTG GSSW
101: CKGCRRYWTE GGSLRNVPVG GSSRKNKRSS TPLASPSNPK LPDLNPPILF SSQIPNKSNK DLNLLSFPVM QDHHHHGMSH FFHMPKIENN NTSSSIYASS
201: SPVSALELLR SNGVSSRGMN TFLPGQMMDS NSVLYSSLGF PTMPDYKQSN NNLSFSIDHH QGIGHNTINS NQRAQDNNDD MNGASRVLFP FSDMKELSST
301: TQEKSHGNNT YWNGMFSNTG GSSW
Arabidopsis Description
DAG1Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:B3H6D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.