Factsheet for Bra039272.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27314	Canola	nucleus	97.5	97.5
CDY61727	Canola	nucleus	99.72	95.99
Bra004525.1-P	Field mustard	nucleus	86.39	88.35
AT2G46590.2	Thale cress	nucleus	87.22	85.09
Bra000429.1-P	Field mustard	nucleus	85.0	82.93
Bra014418.1-P	Field mustard	nucleus	55.28	64.19
KRG97209	Soybean	nucleus	34.72	49.6
KRH68931	Soybean	nucleus	35.28	43.34
Bra013758.1-P	Field mustard	nucleus	34.72	37.2
GSMUA_Achr4P27160_001	Banana	nucleus	28.33	36.43
Bra037401.1-P	Field mustard	nucleus	30.0	36.24
Bra019247.1-P	Field mustard	nucleus	34.44	36.15
Bra010548.1-P	Field mustard	nucleus	34.17	34.94
Os04t0567800-01	Rice	nucleus	34.17	33.88
TraesCS2B01G420400.1	Wheat	nucleus	34.44	32.98
Zm00001d026096_P001	Maize	nucleus, plastid	32.5	32.87
TraesCS2A01G402200.1	Wheat	nucleus	34.44	32.8
TraesCS2D01G399500.1	Wheat	nucleus	34.44	32.8
KXG26925	Sorghum	nucleus	35.28	32.73
Bra027722.1-P	Field mustard	nucleus	29.44	32.72
Zm00001d051439_P001	Maize	nucleus	33.33	32.7
Zm00001d017575_P001	Maize	nucleus	33.89	32.62
Os02t0673700-01	Rice	nucleus	34.17	32.28
TraesCS6A01G255500.1	Wheat	nucleus	34.44	31.63
TraesCS6D01G236700.1	Wheat	nucleus	34.17	31.46
TraesCS6B01G270100.1	Wheat	nucleus	33.33	30.85
Bra009587.1-P	Field mustard	nucleus	13.89	28.25
Bra012804.1-P	Field mustard	nucleus	18.89	28.22
Bra020261.1-P	Field mustard	nucleus	18.06	27.31
Bra006923.1-P	Field mustard	nucleus	18.06	26.86
Bra035956.1-P	Field mustard	nucleus	19.72	26.59
Zm00001d002642_P001	Maize	nucleus	35.28	26.51
KXG31020	Sorghum	nucleus	33.06	26.04
Bra002504.1-P	Field mustard	nucleus	18.61	25.97
HORVU6Hr1G065250.3	Barley	nucleus	33.61	25.74
Bra029352.1-P	Field mustard	nucleus	19.72	25.54
Bra013003.1-P	Field mustard	nucleus	20.83	25.51
Bra010136.1-P	Field mustard	nucleus	25.83	25.27
Bra035873.1-P	Field mustard	nucleus	23.06	24.41
Bra010884.1-P	Field mustard	nucleus	19.72	24.07
Bra032891.1-P	Field mustard	nucleus	19.44	23.57
Bra030089.1-P	Field mustard	nucleus	19.44	23.49
Bra035696.1-P	Field mustard	nucleus	16.67	23.44
Bra014752.1-P	Field mustard	nucleus	22.5	23.14
Bra012277.1-P	Field mustard	nucleus	16.67	22.99
Bra007156.1-P	Field mustard	nucleus	20.83	22.94
Bra017906.1-P	Field mustard	nucleus	16.11	22.92
Bra006675.1-P	Field mustard	nucleus	17.5	22.74
Bra017171.1-P	Field mustard	nucleus	18.89	22.01
Bra000008.1-P	Field mustard	nucleus	17.78	21.84
Bra005181.1-P	Field mustard	nucleus	19.44	21.54
Bra037822.1-P	Field mustard	nucleus	15.83	20.07
Bra031853.1-P	Field mustard	nucleus	16.94	20.07
Bra030696.1-P	Field mustard	nucleus	18.61	20.06
Bra024399.1-P	Field mustard	nucleus	16.67	19.61
Bra035667.1-P	Field mustard	nucleus	17.78	18.6
Bra031588.1-P	Field mustard	nucleus	15.83	17.98
Bra028872.1-P	Field mustard	nucleus	19.72	17.49
Bra005725.1-P	Field mustard	nucleus	19.17	17.12
Bra009588.1-P	Field mustard	plastid	5.0	10.11

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra039272	EnsemblPlants:Bra039272.1	EnsemblPlants:Bra039272.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:M4FDV1	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF15	UniParc:UPI000254463A	InterPro:Znf_Dof	SEG:seg	:

Description

AT2G46590 (E=3e-113) DAG2 | DAG2 (DOF AFFECTING GERMINATION 2); DNA binding / transcription factor

Coordinates

chrA04:+:18792165..18793247

Molecular Weight (calculated)

39238.3 Da

IEP (calculated)

9.138

GRAVY (calculated)

-0.813

Length

360 amino acids

Sequence
(BLAST)

001: MMNVKPMEQI MIPNNNTHQS NTTSSARPNT VLTSSGGVSA AGAIVSTGVS NSNNTSVVVE RKSRPQEKIN CPRCNSTNTK FCYYNNYSLT QPRYFCKGCR
101: RYWTEGGSLR NVPVGGSSRK NKRSSSSNLL QTTPSSLGLT TTLPDLNPPI IFSNQIPNKS KGASQDLNML SFPVMQDQHV HMSKFLQMHK MEGNGNMTHQ
201: QPSSSSSLYG SSSSPVSALE LLRTGVNVSS RSGINSFMPS GPMMDSSNNV MYTSSGFPTM VDYKTSNLSF STDHQGLEHN NNNNNNNNSS GDAHSDHHQG
301: RVLFPFGDQM KELSSSITQE VDHDDNQQQK SHGNNNNNNS SPNNGYWSGM FSTTGGGSSW

Best Arabidopsis Sequence Match ( AT2G46590.1 )
(BLAST)

001: MMNVKPMEQI MIPNNNTHQP NTTSNARPNT ILTSNGVSTA GATVSGVSNN NNNTAVVAER KARPQEKLNC PRCNSTNTKF CYYNNYSLTQ PRYFCKGCRR
101: YWTEGGSLRN VPVGGSSRKN KRSSSSSSSN ILQTIPSSLP DLNPPILFSN QIHNKSKGSS QDLNLLSFPV MQDQHHHHVH MSQFLQMPKM EGNGNITHQQ
201: QPSSSSSVYG SSSSPVSALE LLRTGVNVSS RSGINSSFMP SGSMMDSNTV LYTSSGFPTM VDYKPSNLSF STDHQGLGHN SNNRSEALHS DHHQQGRVLF
301: PFGDQMKELS SSITQEVDHD DNQQQKSHGN NNNNNNSSPN NGYWSGMFST TGGGSSW

Arabidopsis Description

DOF2.5Dof zinc finger protein DOF2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.