Factsheet for Bra031588.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06274	Canola	nucleus	97.79	98.73
CDY61965	Canola	nucleus	95.27	97.11
Bra030696.1-P	Field mustard	nucleus	78.55	74.55
AT1G07640.3	Thale cress	nucleus	74.76	69.91
Bra035667.1-P	Field mustard	nucleus	56.15	51.74
KRH24808	Soybean	nucleus	38.8	40.07
VIT_06s0004g04520.t01	Wine grape	nucleus	38.49	38.12
Bra009587.1-P	Field mustard	nucleus	21.14	37.85
KRH10276	Soybean	nucleus	33.44	34.87
KRH29808	Soybean	nucleus, plastid	36.59	34.63
KRH23056	Soybean	nucleus	27.76	32.71
Bra000008.1-P	Field mustard	nucleus	29.02	31.4
PGSC0003DMT400060216	Potato	nucleus	28.71	30.13
Solyc05g054510.1.1	Tomato	nucleus	27.76	29.53
Bra005181.1-P	Field mustard	nucleus	29.65	28.92
Bra017171.1-P	Field mustard	nucleus	28.08	28.8
Bra014752.1-P	Field mustard	nucleus	31.23	28.29
Bra007156.1-P	Field mustard	nucleus	28.71	27.83
Bra005725.1-P	Field mustard	nucleus	35.02	27.54
Bra028872.1-P	Field mustard	nucleus	33.75	26.35
Bra032891.1-P	Field mustard	nucleus	20.82	22.22
Bra031853.1-P	Field mustard	nucleus	20.82	21.71
Bra037822.1-P	Field mustard	nucleus	19.24	21.48
Bra010884.1-P	Field mustard	nucleus	19.56	21.02
Bra029352.1-P	Field mustard	nucleus	18.3	20.86
Bra012804.1-P	Field mustard	nucleus	15.77	20.75
Bra006923.1-P	Field mustard	nucleus	15.46	20.25
Bra035956.1-P	Field mustard	nucleus	17.03	20.22
Bra020261.1-P	Field mustard	nucleus	15.14	20.17
Bra030089.1-P	Field mustard	nucleus	18.93	20.13
Bra013003.1-P	Field mustard	nucleus	18.61	20.07
Bra002504.1-P	Field mustard	nucleus	16.09	19.77
Bra024399.1-P	Field mustard	nucleus	18.93	19.61
Bra035696.1-P	Field mustard	nucleus	15.14	18.75
Bra037401.1-P	Field mustard	nucleus	17.03	18.12
Bra006675.1-P	Field mustard	nucleus	15.77	18.05
Bra010548.1-P	Field mustard	nucleus	19.87	17.9
Bra013758.1-P	Field mustard	nucleus	18.93	17.86
Bra014418.1-P	Field mustard	nucleus	17.03	17.42
Bra009588.1-P	Field mustard	plastid	9.78	17.42
Bra004525.1-P	Field mustard	nucleus	19.24	17.33
Bra019247.1-P	Field mustard	nucleus	18.61	17.2
Bra017906.1-P	Field mustard	nucleus	13.25	16.6
Bra000429.1-P	Field mustard	nucleus	19.24	16.53
Bra012277.1-P	Field mustard	nucleus	13.25	16.09
Bra039272.1-P	Field mustard	nucleus, plastid	17.98	15.83
Bra035873.1-P	Field mustard	nucleus	16.4	15.29
Bra027722.1-P	Field mustard	nucleus	15.46	15.12
Bra010136.1-P	Field mustard	nucleus	15.77	13.59

Protein Annotations

MapMan:15.5.1.5	ProteinID:ACR48175	ProteinID:ACR48175.1	EnsemblPlantsGene:Bra031588	EnsemblPlants:Bra031588.1	EnsemblPlants:Bra031588.1-P
UniProt:C5HYF6	EMBL:FJ584284	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	PFAM:PD007478
PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF66	UniParc:UPI0001A911F6
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

AT1G07640 (E=7e-049) OBP2 | OBP2; DNA binding / transcription factor

Coordinates

chrA09:+:35682754..35683968

Molecular Weight (calculated)

34607.1 Da

IEP (calculated)

9.589

GRAVY (calculated)

-0.884

Length

317 amino acids

Sequence
(BLAST)

001: MVFSSNWSQP TNPNQLQLNE NGSLVNGHGL LSHQLPPFPP NPNPNHHHAA ASSGLPARLG GFMAERANQT KAPRPEGALK CPRCNSINTK FCYNNNYNPT
101: QPRHYCKGCR RYWTHGGKLR DVPEGGRRRR NSKKNKNGNA KSSSTVNAPS SSSGQLRTNH QFPFLPTLQN LTQLGGIGLN LAAANGNNQA HHIGPSLMND
201: LGFLHVGNER NSHDNNNSEN NLMGPGGFPL FDPTSGPYGF QNEGNIGNDV GLSFPSTSMV DSSIYQTGPV KMEEQPNLVN LSRPVSGLTH PVNQTNQYYW
301: NNSDFSGPSS NDHHQLL

Best Arabidopsis Sequence Match ( AT1G07640.3 )
(BLAST)

001: MAFPSNWSQP TNSNHQHHLQ HQLNENGSII SGHGLVLSHQ LPPLQANPNP NHHHVATSAG LPSRMGGSMA ERARQANIPP LAGPLKCPRC DSSNTKFCYY
101: NNYNLTQPRH FCKGCRRYWT QGGALRNVPV GGGCRRNNKK GKNGNLKSSS SSSKQSSSVN AQSPSSGQLR TNHQFPFSPT LYNLTQLGGI GLNLAATNGN
201: NQAHQIGSSL MMSDLGFLHG RNTSTPMTGN IHENNNNNNN ENNLMASVGS LSPFALFDPT TGLYAFQNDG NIGNNVGISG SSTSMVDSRV YQTPPVKMEE
301: QPNLANLSRP VSGLTSPGNQ TNQYFWPGSD FSGPSNDLL

Arabidopsis Description

OBP2Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q2V4Q1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.