Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G28810.1 | KRH11775 | AT2G34710.1 | 21245844 |
| AT2G28810.1 | KRH36781 | AT2G34710.1 | 21245844 |
| AT2G28810.1 | KRH43001 | AT2G34710.1 | 21245844 |
| AT2G28810.1 | KRH59117 | AT2G34710.1 | 21245844 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10276 | Soybean | nucleus | 79.18 | 70.07 |
| KRH24808 | Soybean | nucleus | 55.39 | 48.53 |
| VIT_06s0004g04520.t01 | Wine grape | nucleus | 51.3 | 43.12 |
| KRH29808 | Soybean | nucleus, plastid | 53.53 | 42.99 |
| PGSC0003DMT400060216 | Potato | nucleus | 40.15 | 35.76 |
| KRH01640 | Soybean | nucleus | 47.21 | 34.99 |
| KRH70477 | Soybean | nucleus | 47.96 | 34.77 |
| Solyc05g054510.1.1 | Tomato | nucleus | 37.92 | 34.23 |
| KRH46814 | Soybean | nucleus | 43.49 | 31.88 |
| KRG99864 | Soybean | nucleus | 42.75 | 31.68 |
| KRG96269 | Soybean | nucleus | 19.33 | 30.23 |
| AT2G28810.1 | Thale cress | nucleus | 37.17 | 29.41 |
| KRH53547 | Soybean | nucleus | 21.93 | 28.64 |
| CDY61965 | Canola | nucleus | 32.71 | 28.3 |
| Bra030696.1-P | Field mustard | nucleus | 34.94 | 28.14 |
| CDY15624 | Canola | nucleus | 34.94 | 28.14 |
| CDX95139 | Canola | nucleus | 34.94 | 27.98 |
| CDX77212 | Canola | nucleus | 35.32 | 27.94 |
| Bra035667.1-P | Field mustard | nucleus | 35.69 | 27.91 |
| CDY31735 | Canola | nucleus | 35.69 | 27.91 |
| Bra031588.1-P | Field mustard | nucleus | 32.71 | 27.76 |
| AT1G07640.3 | Thale cress | nucleus | 34.94 | 27.73 |
| CDY06274 | Canola | nucleus | 32.34 | 27.71 |
| KRH24943 | Soybean | nucleus | 27.88 | 24.59 |
| KRG89059 | Soybean | nucleus | 27.88 | 24.19 |
| KRH21495 | Soybean | nucleus | 24.91 | 24.1 |
| KRH10827 | Soybean | nucleus | 24.54 | 23.16 |
| KRG97209 | Soybean | nucleus | 21.56 | 23.02 |
| KRH22943 | Soybean | nucleus | 24.16 | 22.81 |
| KRH50082 | Soybean | nucleus | 24.16 | 22.57 |
| KRH56758 | Soybean | nucleus | 24.16 | 22.26 |
| KRH10402 | Soybean | nucleus | 23.42 | 22.11 |
| KRH10907 | Soybean | nucleus | 29.0 | 22.1 |
| KRH06442 | Soybean | nucleus | 22.3 | 21.74 |
| KRH03180 | Soybean | nucleus | 24.16 | 21.67 |
| KRH21402 | Soybean | nucleus | 28.25 | 21.29 |
| KRH50083 | Soybean | nucleus | 27.51 | 21.26 |
| KRH47883 | Soybean | nucleus | 22.3 | 20.91 |
| KRH64383 | Soybean | nucleus | 23.05 | 20.88 |
| KRH50000 | Soybean | nucleus | 25.65 | 20.78 |
| KRH74458 | Soybean | nucleus | 26.02 | 20.77 |
| KRH64521 | Soybean | nucleus | 22.3 | 20.76 |
| KRH20416 | Soybean | nucleus | 27.14 | 20.68 |
| KRH20497 | Soybean | nucleus | 25.65 | 20.54 |
| KRH53419 | Soybean | nucleus | 21.93 | 20.42 |
| KRH68931 | Soybean | nucleus | 21.93 | 20.14 |
| KRH54755 | Soybean | nucleus | 22.68 | 20.13 |
| KRH10904 | Soybean | nucleus | 23.42 | 20.13 |
| KRH21403 | Soybean | nucleus | 23.42 | 19.87 |
| KRH20417 | Soybean | nucleus | 24.16 | 19.82 |
| KRH39485 | Soybean | nucleus | 24.91 | 19.59 |
| KRG96256 | Soybean | nucleus | 19.7 | 19.56 |
| KRH57071 | Soybean | nucleus | 23.79 | 19.39 |
| KRH03289 | Soybean | nucleus | 23.79 | 19.39 |
| KRG92523 | Soybean | nucleus | 21.56 | 19.21 |
| KRH76935 | Soybean | nucleus | 23.42 | 18.75 |
| KRH28526 | Soybean | nucleus | 23.42 | 18.58 |
| KRH72174 | Soybean | nucleus | 20.07 | 18.49 |
| KRH54395 | Soybean | nucleus | 23.79 | 18.13 |
| KRH63537 | Soybean | nucleus | 23.05 | 18.02 |
| KRH04709 | Soybean | nucleus | 23.42 | 17.9 |
| KRH63162 | Soybean | nucleus | 22.68 | 17.89 |
| KRG99513 | Soybean | nucleus | 24.54 | 17.89 |
| KRH34272 | Soybean | nucleus | 21.56 | 17.26 |
| KRH32857 | Soybean | extracellular, vacuole | 20.45 | 16.37 |
| KRH45516 | Soybean | nucleus | 24.16 | 16.13 |
Protein Annotations
| EntrezGene:100787775 | MapMan:15.5.1.5 | EMBL:ACUP02008454 | EnsemblPlantsGene:GLYMA_13G335200 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | UniProt:K7M3D9 | EnsemblPlants:KRH23056 | ProteinID:KRH23056 | ProteinID:KRH23056.1 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI00023CF5D6 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:42868623..42870800
Molecular Weight (calculated)
29540.4 Da
IEP (calculated)
10.501
GRAVY (calculated)
-0.490
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSIPVYL DPPNWQQQQQ NQHQANGSNS PHELLPPLPQ PPQAPHVGVE SEQIRSGLMA DRAKIPAPEG VLKCPRCEST NTKFCYFNNY SLSQPRHFCK
101: TCRRYWTRGG ALRNVPVGGG CRRNKKNKRS RSKSPVSTEK PSLPNNTSAI PELIGRFPQP FMASLQSMNR YGVGINTGVN LREIQAQNAS QMEFQIGGLG
201: NGSSVATAGG GGGGGVEQWR FQQFPVNSAA SNSTLFKVKL LKVWLEILMP QVLGLLSCQH GLKWNITVA
101: TCRRYWTRGG ALRNVPVGGG CRRNKKNKRS RSKSPVSTEK PSLPNNTSAI PELIGRFPQP FMASLQSMNR YGVGINTGVN LREIQAQNAS QMEFQIGGLG
201: NGSSVATAGG GGGGGVEQWR FQQFPVNSAA SNSTLFKVKL LKVWLEILMP QVLGLLSCQH GLKWNITVA
001: MVFSSVSSFL DPPINWPQSA NPNNHPHHHQ LQENGSLVSG HHQVLSHHFP QNPNPNHHHV ETAAATTVDP SSLNGQAAER ARLAKNSQPP EGALKCPRCD
101: SANTKFCYFN NYNLTQPRHF CKACRRYWTR GGALRNVPVG GGCRRNKKGK SGNSKSSSSS QNKQSTSMVN ATSPTNTSNV QLQTNSQFPF LPTLQNLTQL
201: GGIGLNLAAI NGNNGGNGNT SSSFLNDLGF FHGGNTSGPV MGNNNENNLM TSLGSSSHFA LFDRTMGLYN FPNEVNMGLS SIGATRVSQT AQVKMEDNHL
301: GNISRPVSGL TSPGNQSNQY WTGQGLPGSS SNDHHHQHLM
101: SANTKFCYFN NYNLTQPRHF CKACRRYWTR GGALRNVPVG GGCRRNKKGK SGNSKSSSSS QNKQSTSMVN ATSPTNTSNV QLQTNSQFPF LPTLQNLTQL
201: GGIGLNLAAI NGNNGGNGNT SSSFLNDLGF FHGGNTSGPV MGNNNENNLM TSLGSSSHFA LFDRTMGLYN FPNEVNMGLS SIGATRVSQT AQVKMEDNHL
301: GNISRPVSGL TSPGNQSNQY WTGQGLPGSS SNDHHHQHLM
Arabidopsis Description
DOF2.2Dof zinc finger protein DOF2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.