Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH54395 | Soybean | nucleus | 92.73 | 90.37 |
| KRH57071 | Soybean | nucleus | 68.31 | 71.21 |
| KRH03289 | Soybean | nucleus | 66.86 | 69.7 |
| PGSC0003DMT400069680 | Potato | nucleus | 48.84 | 60.0 |
| Solyc06g071480.2.1 | Tomato | nucleus | 48.26 | 59.5 |
| GSMUA_Achr10P... | Banana | nucleus | 39.53 | 52.71 |
| AT5G62940.1 | Thale cress | nucleus | 50.0 | 46.24 |
| CDX87270 | Canola | nucleus | 45.64 | 46.04 |
| Bra035873.1-P | Field mustard | nucleus | 45.35 | 45.88 |
| CDY16754 | Canola | nucleus | 45.35 | 45.88 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 36.34 | 45.45 |
| CDY00341 | Canola | nucleus | 48.55 | 45.38 |
| CDX84369 | Canola | nucleus | 48.26 | 44.74 |
| Bra010136.1-P | Field mustard | nucleus | 47.38 | 44.29 |
| Zm00001d017788_P001 | Maize | nucleus | 34.88 | 41.67 |
| EES05649 | Sorghum | nucleus | 35.17 | 41.02 |
| TraesCS6D01G254200.1 | Wheat | nucleus | 35.76 | 40.2 |
| TraesCS6A01G274000.1 | Wheat | nucleus | 35.76 | 40.2 |
| Os02t0707200-00 | Rice | nucleus | 33.43 | 39.93 |
| TraesCS6B01G301500.1 | Wheat | nucleus | 35.47 | 39.87 |
| Zm00001d051577_P001 | Maize | nucleus | 34.3 | 39.73 |
| KRH53547 | Soybean | nucleus | 23.55 | 39.32 |
| KRH06442 | Soybean | nucleus | 27.03 | 33.7 |
| KRH64383 | Soybean | nucleus | 29.07 | 33.67 |
| KRG92523 | Soybean | nucleus | 29.07 | 33.11 |
| KRG97209 | Soybean | nucleus | 23.84 | 32.54 |
| KRG96269 | Soybean | nucleus | 15.99 | 31.98 |
| KRH47883 | Soybean | nucleus | 26.16 | 31.36 |
| KRH24943 | Soybean | nucleus | 25.87 | 29.18 |
| KRG89059 | Soybean | nucleus | 26.16 | 29.03 |
| KRH68931 | Soybean | nucleus | 24.71 | 29.01 |
| KRH34272 | Soybean | nucleus | 27.91 | 28.57 |
| KRH10402 | Soybean | nucleus | 23.55 | 28.42 |
| KRH22943 | Soybean | nucleus | 23.26 | 28.07 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 21.8 | 27.78 |
| KRH21495 | Soybean | nucleus | 20.06 | 24.82 |
| KRG96256 | Soybean | nucleus | 19.48 | 24.72 |
| KRH72174 | Soybean | nucleus | 20.35 | 23.97 |
| KRH10827 | Soybean | nucleus | 19.77 | 23.86 |
| KRH24808 | Soybean | nucleus | 21.22 | 23.78 |
| KRH64521 | Soybean | nucleus | 19.77 | 23.53 |
| KRH53419 | Soybean | nucleus | 19.77 | 23.53 |
| KRH56758 | Soybean | nucleus | 19.77 | 23.29 |
| KRH23056 | Soybean | nucleus | 18.02 | 23.05 |
| KRH50082 | Soybean | nucleus | 19.19 | 22.92 |
| KRH29808 | Soybean | nucleus, plastid | 22.09 | 22.69 |
| KRH03180 | Soybean | nucleus | 19.48 | 22.33 |
| KRH10276 | Soybean | nucleus | 19.48 | 22.04 |
| KRH54755 | Soybean | nucleus | 19.19 | 21.78 |
| KRH32857 | Soybean | extracellular, vacuole | 21.22 | 21.73 |
| KRH10904 | Soybean | nucleus | 19.19 | 21.09 |
| KRH50000 | Soybean | nucleus | 20.35 | 21.08 |
| KRH76935 | Soybean | nucleus | 20.35 | 20.83 |
| KRH10907 | Soybean | nucleus | 21.22 | 20.68 |
| KRH20497 | Soybean | nucleus | 20.06 | 20.54 |
| KRH63162 | Soybean | nucleus | 20.35 | 20.53 |
| KRH21403 | Soybean | nucleus | 18.9 | 20.5 |
| KRH20417 | Soybean | nucleus | 19.48 | 20.43 |
| KRH50083 | Soybean | nucleus | 20.64 | 20.4 |
| KRH28526 | Soybean | nucleus | 20.06 | 20.35 |
| KRH39485 | Soybean | nucleus | 20.06 | 20.18 |
| KRH46814 | Soybean | nucleus | 21.51 | 20.16 |
| KRH20416 | Soybean | nucleus | 20.64 | 20.11 |
| KRG99864 | Soybean | nucleus | 21.22 | 20.11 |
| KRH01640 | Soybean | nucleus | 21.22 | 20.11 |
| KRH70477 | Soybean | nucleus | 21.51 | 19.95 |
| KRH21402 | Soybean | nucleus | 20.64 | 19.89 |
| KRH04709 | Soybean | nucleus | 20.35 | 19.89 |
| KRH74458 | Soybean | nucleus | 19.19 | 19.58 |
| KRG99513 | Soybean | nucleus | 18.31 | 17.07 |
| KRH45516 | Soybean | nucleus | 18.9 | 16.13 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:778107 | EMBL:ACUP02002699 | EnsemblPlantsGene:GLYMA_04G183700 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010067 | GO:GO:0010087 |
| GO:GO:0045893 | UniProt:I1JX78 | InterPro:IPR003851 | EnsemblPlants:KRH63537 | ProteinID:KRH63537 | ProteinID:KRH63537.1 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF80 |
| UniParc:UPI000233A806 | InterPro:Znf_Dof | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:45193370..45195791
Molecular Weight (calculated)
38077.7 Da
IEP (calculated)
7.416
GRAVY (calculated)
-0.745
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLSSLHVCM DSSDHWLQGT IHEESGMDSS SSPSGDMLTC SRPMIERRLR PPHDQALKCP RCDSTHTKFC YYNNYSLSQP RYFCKTCRRY WTKGGTLRNI
101: PVGGGCRKNK KVSAKKSNDH QLVNNNNINQ TRPPHHHHPK DLQLSSFPDV QFSHLSNLLG TNANPSFMEG KYGIGMIENP RPIDFMMESK LEGIIGSGSS
201: SRNFDFFGNN DMSMGMASVG LGDMNGATTH QNGLPPNLYH HGLSAFGGMS MSLDHGNNNN SDNNGANRYL MDSCQRLMLP YDVSNEDHNA QIDVKPNPKQ
301: LLSLEWQDQG CSDAGKDSFG YLNGPGSWTG MMNGYGSSTT HPLV
101: PVGGGCRKNK KVSAKKSNDH QLVNNNNINQ TRPPHHHHPK DLQLSSFPDV QFSHLSNLLG TNANPSFMEG KYGIGMIENP RPIDFMMESK LEGIIGSGSS
201: SRNFDFFGNN DMSMGMASVG LGDMNGATTH QNGLPPNLYH HGLSAFGGMS MSLDHGNNNN SDNNGANRYL MDSCQRLMLP YDVSNEDHNA QIDVKPNPKQ
301: LLSLEWQDQG CSDAGKDSFG YLNGPGSWTG MMNGYGSSTT HPLV
001: MGLTSLQVCM DSDWLQESES SGGSMLDSST NSPSAADILA ACSTRPQASA VAVAAAALMD GGRRLRPPHD HPQKCPRCES THTKFCYYNN YSLSQPRYFC
101: KTCRRYWTKG GTLRNIPVGG GCRKNKKPSS SNSSSSTSSG KKPSNIVTAN TSDLMALAHS HQNYQHSPLG FSHFGGMMGS YSTPEHGNVG FLESKYGGLL
201: SQSPRPIDFL DSKFDLMGVN NDNLVMVNHG SNGDHHHHHN HHMGLNHGVG LNNNNNNGGF NGISTGGNGN GGGLMDISTC QRLMLSNYDH HHYNHQEDHQ
301: RVATIMDVKP NPKLLSLDWQ QDQCYSNGGG SGGAGKSDGG GYGNGGYING LGSSWNGLMN GYGTSTKTNS LV
101: KTCRRYWTKG GTLRNIPVGG GCRKNKKPSS SNSSSSTSSG KKPSNIVTAN TSDLMALAHS HQNYQHSPLG FSHFGGMMGS YSTPEHGNVG FLESKYGGLL
201: SQSPRPIDFL DSKFDLMGVN NDNLVMVNHG SNGDHHHHHN HHMGLNHGVG LNNNNNNGGF NGISTGGNGN GGGLMDISTC QRLMLSNYDH HHYNHQEDHQ
301: RVATIMDVKP NPKLLSLDWQ QDQCYSNGGG SGGAGKSDGG GYGNGGYING LGSSWNGLMN GYGTSTKTNS LV
Arabidopsis Description
DOF5.6HCA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UF22]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.