Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035873.1-P | Field mustard | nucleus | 98.82 | 98.82 |
| CDX87270 | Canola | nucleus | 97.65 | 97.36 |
| CDY00341 | Canola | nucleus | 89.41 | 82.61 |
| CDX84369 | Canola | nucleus | 89.71 | 82.21 |
| AT5G62940.1 | Thale cress | nucleus | 88.82 | 81.18 |
| CDY70840 | Canola | nucleus | 17.94 | 53.98 |
| Solyc06g071480.2.1 | Tomato | nucleus | 40.29 | 49.1 |
| PGSC0003DMT400069680 | Potato | nucleus | 40.0 | 48.57 |
| VIT_17s0000g08290.t01 | Wine grape | nucleus | 43.53 | 48.05 |
| KRH63537 | Soybean | nucleus | 45.88 | 45.35 |
| GSMUA_Achr10P... | Banana | nucleus | 31.47 | 41.47 |
| Zm00001d017788_P001 | Maize | nucleus | 33.53 | 39.58 |
| EES05649 | Sorghum | nucleus | 33.82 | 38.98 |
| Zm00001d051577_P001 | Maize | nucleus | 32.94 | 37.71 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 30.0 | 37.09 |
| TraesCS6D01G254200.1 | Wheat | nucleus | 31.47 | 34.97 |
| Os02t0707200-00 | Rice | nucleus | 29.41 | 34.72 |
| TraesCS6B01G301500.1 | Wheat | nucleus | 31.18 | 34.64 |
| TraesCS6A01G274000.1 | Wheat | nucleus | 31.18 | 34.64 |
| CDY07781 | Canola | nucleus | 18.82 | 29.91 |
| CDY53379 | Canola | nucleus | 18.53 | 28.77 |
| CDY31568 | Canola | nucleus | 20.59 | 27.13 |
| CDY51722 | Canola | nucleus | 22.06 | 26.98 |
| CDY07156 | Canola | nucleus | 22.06 | 26.88 |
| CDX80191 | Canola | nucleus | 20.29 | 26.85 |
| CDY09221 | Canola | nucleus | 20.29 | 26.74 |
| CDX71704 | Canola | nucleus | 26.18 | 26.57 |
| CDX71050 | Canola | nucleus | 19.41 | 26.09 |
| CDX86775 | Canola | nucleus | 23.82 | 26.05 |
| CDY08775 | Canola | nucleus | 15.0 | 26.02 |
| CDY64622 | Canola | nucleus | 24.71 | 26.01 |
| CDY57876 | Canola | nucleus | 27.06 | 25.48 |
| CDY41539 | Canola | nucleus | 27.35 | 25.41 |
| CDX80030 | Canola | nucleus | 27.06 | 25.27 |
| CDX79743 | Canola | nucleus | 21.76 | 25.26 |
| CDY03494 | Canola | nucleus | 25.29 | 25.0 |
| CDX77184 | Canola | nucleus | 18.82 | 25.0 |
| CDY35454 | Canola | nucleus | 25.0 | 24.85 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 19.71 | 24.81 |
| CDX87189 | Canola | nucleus | 18.24 | 24.8 |
| CDY71684 | Canola | nucleus | 24.41 | 24.78 |
| CDY72657 | Canola | nucleus | 21.18 | 24.66 |
| CDY29082 | Canola | nucleus | 17.35 | 24.58 |
| CDY71763 | Canola | nucleus | 24.71 | 24.49 |
| CDX92613 | Canola | nucleus | 24.71 | 24.49 |
| CDX90602 | Canola | nucleus | 17.35 | 24.48 |
| CDX89134 | Canola | extracellular, vacuole | 25.0 | 24.43 |
| CDY08392 | Canola | nucleus | 24.12 | 24.26 |
| CDX95706 | Canola | nucleus | 25.88 | 23.85 |
| CDX88742 | Canola | nucleus | 19.41 | 23.83 |
| CDX83357 | Canola | nucleus | 26.18 | 23.8 |
| CDY65260 | Canola | nucleus | 21.47 | 23.62 |
| CDY04620 | Canola | nucleus | 17.65 | 23.62 |
| CDY16836 | Canola | nucleus | 18.53 | 23.6 |
| CDY61727 | Canola | nucleus | 25.88 | 23.53 |
| CDY00373 | Canola | nucleus | 17.94 | 23.46 |
| CDX91370 | Canola | nucleus | 22.35 | 23.38 |
| CDX74947 | Canola | nucleus | 22.35 | 23.38 |
| CDY61064 | Canola | nucleus | 17.94 | 23.37 |
| CDY50231 | Canola | nucleus | 17.35 | 23.32 |
| CDX93365 | Canola | nucleus | 21.18 | 23.3 |
| CDY27314 | Canola | nucleus | 24.41 | 23.06 |
| CDY40813 | Canola | nucleus | 19.12 | 22.97 |
| CDX73385 | Canola | nucleus | 20.29 | 22.85 |
| CDX78095 | Canola | nucleus | 16.18 | 22.73 |
| CDY59600 | Canola | nucleus | 16.18 | 22.54 |
| CDY02191 | Canola | nucleus | 19.12 | 22.11 |
| CDY42836 | Canola | nucleus | 18.53 | 22.03 |
| CDY69145 | Canola | nucleus, plastid | 19.41 | 20.95 |
| CDY70312 | Canola | nucleus | 17.35 | 20.77 |
| CDY15624 | Canola | nucleus | 20.29 | 20.66 |
| CDY33948 | Canola | nucleus | 17.94 | 20.2 |
| CDY37834 | Canola | nucleus | 17.94 | 20.07 |
| CDX77212 | Canola | nucleus | 19.71 | 19.71 |
| CDX95139 | Canola | nucleus | 19.41 | 19.64 |
| CDY70838 | Canola | nucleus | 17.65 | 19.61 |
| CDY70666 | Canola | nucleus | 17.06 | 19.53 |
| CDY72049 | Canola | nucleus | 17.06 | 19.53 |
| CDY31735 | Canola | nucleus | 19.71 | 19.48 |
| CDY40213 | Canola | nucleus | 20.29 | 19.44 |
| CDX76102 | Canola | nucleus | 21.47 | 19.16 |
| CDX81292 | Canola | nucleus | 15.88 | 19.15 |
| CDY35729 | Canola | nucleus | 16.47 | 18.73 |
| CDY40358 | Canola | nucleus | 18.24 | 18.62 |
| CDY24798 | Canola | nucleus | 24.71 | 18.54 |
| CDX90142 | Canola | nucleus | 17.06 | 18.35 |
| CDY70704 | Canola | nucleus | 18.53 | 17.26 |
| CDY66590 | Canola | nucleus | 16.47 | 17.13 |
| CDY15678 | Canola | nucleus | 16.47 | 17.13 |
| CDY61965 | Canola | nucleus | 15.59 | 17.04 |
| CDY06274 | Canola | nucleus | 15.29 | 16.56 |
| CDY55549 | Canola | nucleus | 19.12 | 16.17 |
| CDY04855 | Canola | nucleus | 19.12 | 16.01 |
| CDX80822 | Canola | nucleus | 19.12 | 16.01 |
| CDY55422 | Canola | nucleus | 18.82 | 15.96 |
| CDY08776 | Canola | nucleus | 2.35 | 9.3 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078FUN8 | UniProt:A0A078FUN8 | EnsemblPlants:CDY16754 | ProteinID:CDY16754 | ProteinID:CDY16754.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00094627001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF80 | UniParc:UPI0004EE71AF | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g06280DBnaA09g06280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUN8]
Coordinates
chrLK032067:+:162908..164804
Molecular Weight (calculated)
36610.6 Da
IEP (calculated)
8.003
GRAVY (calculated)
-0.685
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLTSLQACM DSDWLQEAES SGGSMLDSTT TSPSAADILA ACSTRPQASA MAVAAAAMMD GGRRLRPPHD HPQKCPRCES THTKFCYYNN YSLSQPRYFC
101: KTCRRYWTKG GTLRNIPVGG GCRKNKKPSS SNSPSSKKPN IVTSDLMALA HSHQNYQNAS LGFQHFGGNG MMGSYTAPDH SNVGYLESKY GGLLSQSPRP
201: IDFLDSKFDL MGVNNNNLVM VDHGSNGDHH HNLHNNVGGG GLMDISACQR LMLSNYDHHH YNHHEDNQRV TSIMDVKPSP KLLSLDWQQE QGYSEGSGNG
301: GGGRSDGGGY GGGGYINGLG SSWNGLMNGY GSSTKTNSLV
101: KTCRRYWTKG GTLRNIPVGG GCRKNKKPSS SNSPSSKKPN IVTSDLMALA HSHQNYQNAS LGFQHFGGNG MMGSYTAPDH SNVGYLESKY GGLLSQSPRP
201: IDFLDSKFDL MGVNNNNLVM VDHGSNGDHH HNLHNNVGGG GLMDISACQR LMLSNYDHHH YNHHEDNQRV TSIMDVKPSP KLLSLDWQQE QGYSEGSGNG
301: GGGRSDGGGY GGGGYINGLG SSWNGLMNGY GSSTKTNSLV
001: MGLTSLQVCM DSDWLQESES SGGSMLDSST NSPSAADILA ACSTRPQASA VAVAAAALMD GGRRLRPPHD HPQKCPRCES THTKFCYYNN YSLSQPRYFC
101: KTCRRYWTKG GTLRNIPVGG GCRKNKKPSS SNSSSSTSSG KKPSNIVTAN TSDLMALAHS HQNYQHSPLG FSHFGGMMGS YSTPEHGNVG FLESKYGGLL
201: SQSPRPIDFL DSKFDLMGVN NDNLVMVNHG SNGDHHHHHN HHMGLNHGVG LNNNNNNGGF NGISTGGNGN GGGLMDISTC QRLMLSNYDH HHYNHQEDHQ
301: RVATIMDVKP NPKLLSLDWQ QDQCYSNGGG SGGAGKSDGG GYGNGGYING LGSSWNGLMN GYGTSTKTNS LV
101: KTCRRYWTKG GTLRNIPVGG GCRKNKKPSS SNSSSSTSSG KKPSNIVTAN TSDLMALAHS HQNYQHSPLG FSHFGGMMGS YSTPEHGNVG FLESKYGGLL
201: SQSPRPIDFL DSKFDLMGVN NDNLVMVNHG SNGDHHHHHN HHMGLNHGVG LNNNNNNGGF NGISTGGNGN GGGLMDISTC QRLMLSNYDH HHYNHQEDHQ
301: RVATIMDVKP NPKLLSLDWQ QDQCYSNGGG SGGAGKSDGG GYGNGGYING LGSSWNGLMN GYGTSTKTNS LV
Arabidopsis Description
DOF5.6HCA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UF22]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.