Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15624 | Canola | nucleus | 82.74 | 83.23 |
| CDY61965 | Canola | nucleus | 74.4 | 80.39 |
| CDY06274 | Canola | nucleus | 73.81 | 78.98 |
| AT1G07640.3 | Thale cress | nucleus | 77.98 | 77.29 |
| CDX77212 | Canola | nucleus | 56.55 | 55.88 |
| CDY31735 | Canola | nucleus | 56.55 | 55.23 |
| CDY70840 | Canola | nucleus | 16.07 | 47.79 |
| KRH24808 | Soybean | nucleus | 38.69 | 42.35 |
| VIT_06s0004g04520.t01 | Wine grape | nucleus | 38.99 | 40.94 |
| CDY07781 | Canola | nucleus | 25.0 | 39.25 |
| KRH10276 | Soybean | nucleus | 33.63 | 37.17 |
| KRH29808 | Soybean | nucleus, plastid | 36.9 | 37.01 |
| KRH23056 | Soybean | nucleus | 27.98 | 34.94 |
| CDX79743 | Canola | nucleus | 29.76 | 34.13 |
| PGSC0003DMT400060216 | Potato | nucleus | 30.06 | 33.44 |
| CDY69145 | Canola | nucleus, plastid | 30.65 | 32.7 |
| CDX73385 | Canola | nucleus | 29.17 | 32.45 |
| CDY40358 | Canola | nucleus | 32.14 | 32.43 |
| CDY65260 | Canola | nucleus | 29.76 | 32.36 |
| CDX74947 | Canola | nucleus | 31.25 | 32.31 |
| CDX93365 | Canola | nucleus | 29.46 | 32.04 |
| CDX91370 | Canola | nucleus | 30.95 | 32.0 |
| Solyc05g054510.1.1 | Tomato | nucleus | 27.98 | 31.54 |
| CDY70704 | Canola | nucleus | 33.63 | 30.96 |
| CDY55549 | Canola | nucleus | 36.31 | 30.35 |
| CDX80822 | Canola | nucleus | 36.31 | 30.05 |
| CDY08775 | Canola | nucleus | 17.26 | 29.59 |
| CDY55422 | Canola | nucleus | 35.12 | 29.43 |
| CDY04855 | Canola | nucleus | 34.82 | 28.82 |
| CDY40213 | Canola | nucleus | 30.36 | 28.73 |
| CDX76102 | Canola | nucleus | 32.14 | 28.35 |
| CDX87189 | Canola | nucleus | 19.05 | 25.6 |
| CDY53379 | Canola | nucleus | 16.07 | 24.66 |
| CDX81292 | Canola | nucleus | 20.54 | 24.47 |
| CDY33948 | Canola | nucleus | 21.73 | 24.17 |
| CDY29082 | Canola | nucleus | 17.26 | 24.17 |
| CDX90602 | Canola | nucleus | 17.26 | 24.07 |
| CDY40813 | Canola | nucleus | 20.24 | 24.03 |
| CDY37834 | Canola | nucleus | 21.73 | 24.01 |
| CDY16836 | Canola | nucleus | 19.05 | 23.97 |
| CDY70312 | Canola | nucleus | 20.24 | 23.94 |
| CDY42836 | Canola | nucleus | 20.24 | 23.78 |
| CDY70838 | Canola | nucleus | 21.43 | 23.53 |
| CDY72049 | Canola | nucleus | 20.24 | 22.9 |
| CDY70666 | Canola | nucleus | 20.24 | 22.9 |
| CDY31568 | Canola | nucleus | 17.56 | 22.87 |
| CDX78095 | Canola | nucleus | 16.37 | 22.73 |
| CDY59600 | Canola | nucleus | 16.37 | 22.54 |
| CDX71050 | Canola | nucleus | 16.96 | 22.53 |
| CDX80191 | Canola | nucleus | 16.96 | 22.18 |
| CDY02191 | Canola | nucleus | 19.35 | 22.11 |
| CDY35729 | Canola | nucleus | 19.64 | 22.07 |
| CDX90142 | Canola | nucleus | 20.54 | 21.84 |
| CDY09221 | Canola | nucleus | 16.67 | 21.71 |
| CDY72657 | Canola | nucleus | 18.75 | 21.58 |
| CDY07156 | Canola | nucleus | 17.86 | 21.51 |
| CDY51722 | Canola | nucleus | 17.56 | 21.22 |
| CDX77184 | Canola | nucleus | 16.07 | 21.09 |
| CDY35454 | Canola | nucleus | 21.43 | 21.05 |
| CDX88742 | Canola | nucleus | 17.26 | 20.94 |
| CDY03494 | Canola | nucleus | 21.13 | 20.64 |
| CDY71684 | Canola | nucleus | 20.54 | 20.6 |
| CDX86775 | Canola | nucleus | 19.05 | 20.58 |
| CDY71763 | Canola | nucleus | 20.83 | 20.41 |
| CDX92613 | Canola | nucleus | 20.83 | 20.41 |
| CDY66590 | Canola | nucleus | 19.64 | 20.18 |
| CDY64622 | Canola | nucleus | 19.35 | 20.12 |
| CDY04620 | Canola | nucleus | 15.18 | 20.08 |
| CDY15678 | Canola | nucleus | 19.35 | 19.88 |
| CDX80030 | Canola | nucleus | 21.43 | 19.78 |
| CDY50231 | Canola | nucleus | 14.88 | 19.76 |
| CDY16754 | Canola | nucleus | 19.64 | 19.41 |
| CDX71704 | Canola | nucleus | 19.35 | 19.4 |
| CDY41539 | Canola | nucleus | 21.13 | 19.4 |
| CDX87270 | Canola | nucleus | 19.64 | 19.35 |
| CDX95706 | Canola | nucleus | 21.13 | 19.24 |
| CDX83357 | Canola | nucleus | 21.13 | 18.98 |
| CDX89134 | Canola | extracellular, vacuole | 19.64 | 18.97 |
| CDY00373 | Canola | nucleus | 14.58 | 18.85 |
| CDY61064 | Canola | nucleus | 14.58 | 18.77 |
| CDY27314 | Canola | nucleus | 19.94 | 18.61 |
| CDY57876 | Canola | nucleus | 19.94 | 18.56 |
| CDY61727 | Canola | nucleus | 20.54 | 18.45 |
| CDX84369 | Canola | nucleus | 19.64 | 17.79 |
| CDY08392 | Canola | nucleus | 17.86 | 17.75 |
| CDY00341 | Canola | nucleus | 19.35 | 17.66 |
| CDY24798 | Canola | nucleus | 21.73 | 16.11 |
| CDY08776 | Canola | nucleus | 3.27 | 12.79 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078E3L1 | EnsemblPlants:CDX95139 | ProteinID:CDX95139 | ProteinID:CDX95139.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00100685001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI0004EEE6A1 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaC05g05320D
Coordinates
chrLK031886:+:1350927..1352267
Molecular Weight (calculated)
36454.1 Da
IEP (calculated)
9.787
GRAVY (calculated)
-0.799
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSDWSQP TNSNHQQHQL HENGSLVSGH GLLSHQLQPY PPNPNPNYHH AAASSGLPAR LGGSMAERAR QAKAPPPEGA RKCPRCDSLN TKFCYYNNYN
101: LTQPRYFCKG CRRYWTHGGA QRNVPVGGGS RRNSKKGKNG NSKSSSSSSK QSSSTVNAPS SNSGQLKTNH QFPFLPTLHN LTQLGGIGLN LAATNGNYCQ
201: AHQIGPSLMN DLGFLHVGNG RTGNIHDNNN NSGENNLMAA AGSMNQFTLF DPATGLHAFQ NESNIGNNFG ISFSSTSMVD SRAYQTTPVK MEEQPSLVNL
301: SRPVSSLTPP GNQTNQYFWT NSDLSGPFSK DHHQLL
101: LTQPRYFCKG CRRYWTHGGA QRNVPVGGGS RRNSKKGKNG NSKSSSSSSK QSSSTVNAPS SNSGQLKTNH QFPFLPTLHN LTQLGGIGLN LAATNGNYCQ
201: AHQIGPSLMN DLGFLHVGNG RTGNIHDNNN NSGENNLMAA AGSMNQFTLF DPATGLHAFQ NESNIGNNFG ISFSSTSMVD SRAYQTTPVK MEEQPSLVNL
301: SRPVSSLTPP GNQTNQYFWT NSDLSGPFSK DHHQLL
001: MAFPSNWSQP TNSNHQHHLQ HQLNENGSII SGHGLVLSHQ LPPLQANPNP NHHHVATSAG LPSRMGGSMA ERARQANIPP LAGPLKCPRC DSSNTKFCYY
101: NNYNLTQPRH FCKGCRRYWT QGGALRNVPV GGGCRRNNKK GKNGNLKSSS SSSKQSSSVN AQSPSSGQLR TNHQFPFSPT LYNLTQLGGI GLNLAATNGN
201: NQAHQIGSSL MMSDLGFLHG RNTSTPMTGN IHENNNNNNN ENNLMASVGS LSPFALFDPT TGLYAFQNDG NIGNNVGISG SSTSMVDSRV YQTPPVKMEE
301: QPNLANLSRP VSGLTSPGNQ TNQYFWPGSD FSGPSNDLL
101: NNYNLTQPRH FCKGCRRYWT QGGALRNVPV GGGCRRNNKK GKNGNLKSSS SSSKQSSSVN AQSPSSGQLR TNHQFPFSPT LYNLTQLGGI GLNLAATNGN
201: NQAHQIGSSL MMSDLGFLHG RNTSTPMTGN IHENNNNNNN ENNLMASVGS LSPFALFDPT TGLYAFQNDG NIGNNVGISG SSTSMVDSRV YQTPPVKMEE
301: QPNLANLSRP VSGLTSPGNQ TNQYFWPGSD FSGPSNDLL
Arabidopsis Description
OBP2Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q2V4Q1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.