Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035956.1-P | Field mustard | nucleus | 91.2 | 85.39 |
| CDY16836 | Canola | nucleus | 91.2 | 85.39 |
| CDY02191 | Canola | nucleus | 81.6 | 69.39 |
| CDY40813 | Canola | nucleus | 77.6 | 68.55 |
| CDY42836 | Canola | nucleus | 76.8 | 67.13 |
| AT5G60850.1 | Thale cress | nucleus | 78.4 | 63.84 |
| CDY70840 | Canola | nucleus | 20.4 | 45.13 |
| KRH56758 | Soybean | nucleus | 47.2 | 40.41 |
| KRH03180 | Soybean | nucleus | 48.0 | 40.0 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 47.6 | 37.42 |
| KRH54755 | Soybean | nucleus | 42.8 | 35.31 |
| PGSC0003DMT400010397 | Potato | nucleus | 44.8 | 35.11 |
| KRH63162 | Soybean | nucleus | 42.8 | 31.38 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 22.8 | 29.23 |
| CDY08775 | Canola | nucleus | 22.0 | 28.06 |
| Zm00001d051700_P001 | Maize | mitochondrion | 26.4 | 26.09 |
| CDY53379 | Canola | nucleus | 22.4 | 25.57 |
| CDY07781 | Canola | nucleus | 21.6 | 25.23 |
| Os02t0726300-01 | Rice | nucleus | 27.2 | 24.11 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 22.8 | 24.05 |
| CDX80191 | Canola | nucleus | 24.4 | 23.74 |
| CDX71050 | Canola | nucleus | 24.0 | 23.72 |
| CDY09221 | Canola | nucleus | 24.4 | 23.64 |
| CDY31568 | Canola | nucleus | 24.4 | 23.64 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 27.2 | 23.45 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 26.8 | 23.18 |
| CDX78095 | Canola | nucleus | 22.4 | 23.14 |
| TraesCS6A01G287700.1 | Wheat | nucleus | 26.8 | 23.02 |
| CDY51722 | Canola | nucleus | 25.6 | 23.02 |
| CDY07156 | Canola | nucleus | 25.6 | 22.94 |
| Zm00001d017900_P001 | Maize | nucleus | 27.2 | 22.67 |
| CDY59600 | Canola | nucleus | 22.0 | 22.54 |
| CDY29082 | Canola | nucleus | 21.6 | 22.5 |
| CDX90602 | Canola | nucleus | 21.6 | 22.41 |
| CDX77184 | Canola | nucleus | 22.8 | 22.27 |
| CDY70312 | Canola | nucleus | 25.2 | 22.18 |
| HORVU7Hr1G043250.2 | Barley | nucleus | 25.2 | 22.18 |
| TraesCS7D01G215300.1 | Wheat | nucleus | 25.2 | 22.18 |
| CDY72657 | Canola | nucleus | 25.6 | 21.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.4 | 21.86 |
| CDX88742 | Canola | nucleus | 24.0 | 21.66 |
| TraesCS7A01G213400.1 | Wheat | nucleus | 24.4 | 21.48 |
| Os06t0284500-00 | Rice | nucleus | 24.8 | 21.45 |
| CDY50231 | Canola | nucleus | 21.6 | 21.34 |
| CDY69145 | Canola | nucleus, plastid | 26.8 | 21.27 |
| CDY04620 | Canola | nucleus | 21.6 | 21.26 |
| CDY00373 | Canola | nucleus | 22.0 | 21.15 |
| CDY61064 | Canola | nucleus | 22.0 | 21.07 |
| KXG30845 | Sorghum | nucleus | 25.6 | 21.05 |
| CDX81292 | Canola | nucleus | 23.6 | 20.92 |
| CDX73385 | Canola | nucleus | 25.2 | 20.86 |
| CDY33948 | Canola | nucleus | 25.2 | 20.86 |
| CDX80030 | Canola | nucleus | 30.0 | 20.6 |
| CDY71684 | Canola | nucleus | 27.6 | 20.6 |
| CDY03494 | Canola | nucleus | 28.0 | 20.35 |
| CDY41539 | Canola | nucleus | 29.6 | 20.22 |
| CDX92613 | Canola | nucleus | 27.6 | 20.12 |
| CDY71763 | Canola | nucleus | 27.6 | 20.12 |
| CDY37834 | Canola | nucleus | 24.4 | 20.07 |
| CDY27314 | Canola | nucleus | 28.8 | 20.0 |
| CDY35454 | Canola | nucleus | 27.2 | 19.88 |
| CDY61727 | Canola | nucleus | 29.6 | 19.79 |
| CDY15624 | Canola | nucleus | 26.4 | 19.76 |
| CDX77212 | Canola | nucleus | 26.8 | 19.71 |
| CDX86775 | Canola | nucleus | 24.4 | 19.61 |
| CDY70838 | Canola | nucleus | 24.0 | 19.61 |
| CDY08392 | Canola | nucleus | 26.4 | 19.53 |
| CDY31735 | Canola | nucleus | 26.8 | 19.48 |
| CDY35729 | Canola | nucleus | 23.2 | 19.4 |
| CDX83357 | Canola | nucleus | 28.8 | 19.25 |
| CDX95706 | Canola | nucleus | 28.4 | 19.24 |
| TraesCS7B01G120600.1 | Wheat | nucleus | 24.4 | 19.12 |
| CDX71704 | Canola | nucleus | 25.6 | 19.1 |
| CDX95139 | Canola | nucleus | 25.6 | 19.05 |
| CDY40358 | Canola | nucleus | 25.2 | 18.92 |
| CDY64622 | Canola | nucleus | 24.4 | 18.89 |
| CDY70666 | Canola | nucleus | 22.4 | 18.86 |
| CDY72049 | Canola | nucleus | 22.4 | 18.86 |
| CDX79743 | Canola | nucleus | 22.0 | 18.77 |
| CDY15678 | Canola | nucleus | 24.4 | 18.65 |
| CDY66590 | Canola | nucleus | 24.4 | 18.65 |
| CDX87270 | Canola | nucleus | 25.2 | 18.48 |
| CDY16754 | Canola | nucleus | 24.8 | 18.24 |
| CDY00341 | Canola | nucleus | 26.8 | 18.21 |
| CDX74947 | Canola | nucleus | 23.6 | 18.15 |
| CDX93365 | Canola | nucleus | 22.4 | 18.12 |
| CDY65260 | Canola | nucleus | 22.4 | 18.12 |
| CDX90142 | Canola | nucleus | 22.8 | 18.04 |
| CDX76102 | Canola | nucleus | 27.2 | 17.85 |
| CDX91370 | Canola | nucleus | 23.2 | 17.85 |
| CDX89134 | Canola | extracellular, vacuole | 24.8 | 17.82 |
| CDY57876 | Canola | nucleus | 25.6 | 17.73 |
| CDY61965 | Canola | nucleus | 22.0 | 17.68 |
| CDY70704 | Canola | nucleus | 25.6 | 17.53 |
| CDX84369 | Canola | nucleus | 26.0 | 17.52 |
| CDY40213 | Canola | nucleus | 24.8 | 17.46 |
| CDY06274 | Canola | nucleus | 21.2 | 16.88 |
| CDY55422 | Canola | nucleus | 26.0 | 16.21 |
| CDY04855 | Canola | nucleus | 26.0 | 16.01 |
| CDY55549 | Canola | nucleus | 25.6 | 15.92 |
| CDX80822 | Canola | nucleus | 25.2 | 15.52 |
| CDY24798 | Canola | nucleus | 27.6 | 15.23 |
| CDY08776 | Canola | nucleus | 2.0 | 5.81 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078DFK0 | EnsemblPlants:CDX87189 | ProteinID:CDX87189 | ProteinID:CDX87189.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00146115001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF71 | UniParc:UPI0004EB79BA |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaC09g05040D
Coordinates
chrLK031849:+:1011069..1011821
Molecular Weight (calculated)
27203.2 Da
IEP (calculated)
7.202
GRAVY (calculated)
-0.771
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDIHDYSMT GEGGDRRMRV HQNNILNHHQ SLKCPRCNSL NTKFCYYNNY NHSQPRHFCK NCRRYWTKGG VLRNVPVGGG CRKAKRSKSK QPPSSSSTST
101: ADKPTAQDGE EKPSSSESSS LPASTSTATA ATAAAAKGVM GADMHNLKLY GNGIEWSTLL GQGSSDGGVF SEMGGFTAAS SIATTPFGFG GNTVQQQFED
201: RTAQVDPTME FEPLDWGSSG ADQTLFDLTS TADNAYWSHQ DQTDLYLPQF
101: ADKPTAQDGE EKPSSSESSS LPASTSTATA ATAAAAKGVM GADMHNLKLY GNGIEWSTLL GQGSSDGGVF SEMGGFTAAS SIATTPFGFG GNTVQQQFED
201: RTAQVDPTME FEPLDWGSSG ADQTLFDLTS TADNAYWSHQ DQTDLYLPQF
001: MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
Arabidopsis Description
DOF5.4OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.