Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71763 | Canola | nucleus | 99.42 | 99.42 |
| Bra019247.1-P | Field mustard | nucleus | 99.13 | 99.13 |
| CDY71684 | Canola | nucleus | 96.79 | 99.1 |
| CDY03494 | Canola | nucleus | 89.8 | 89.53 |
| CDY72657 | Canola | nucleus | 76.09 | 89.38 |
| AT4G24060.1 | Thale cress | nucleus | 86.01 | 86.26 |
| CDY35454 | Canola | nucleus | 85.13 | 85.38 |
| CDY70840 | Canola | nucleus | 23.91 | 72.57 |
| CDY24798 | Canola | nucleus | 85.71 | 64.9 |
| KRG92523 | Soybean | nucleus | 44.02 | 50.0 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 21.87 | 46.58 |
| KRH34272 | Soybean | nucleus | 43.15 | 44.05 |
| CDY08392 | Canola | nucleus | 42.86 | 43.49 |
| Solyc03g082840.2.1 | Tomato | nucleus | 32.07 | 42.64 |
| PGSC0003DMT400047705 | Potato | nucleus | 31.78 | 41.76 |
| VIT_15s0046g00150.t01 | Wine grape | nucleus | 36.15 | 39.24 |
| GSMUA_Achr11P... | Banana | nucleus | 32.65 | 38.1 |
| CDX71704 | Canola | nucleus | 34.69 | 35.52 |
| CDX95706 | Canola | nucleus | 37.9 | 35.23 |
| CDX86775 | Canola | nucleus | 31.78 | 35.05 |
| CDY61727 | Canola | nucleus | 38.19 | 35.03 |
| CDX80030 | Canola | nucleus | 37.03 | 34.89 |
| CDX83357 | Canola | nucleus | 37.9 | 34.76 |
| CDY27314 | Canola | nucleus | 36.44 | 34.72 |
| CDY41539 | Canola | nucleus | 37.03 | 34.7 |
| CDY64622 | Canola | nucleus | 32.65 | 34.67 |
| CDY57876 | Canola | nucleus | 34.69 | 32.96 |
| CDY51722 | Canola | nucleus | 26.53 | 32.73 |
| CDX89134 | Canola | extracellular, vacuole | 32.94 | 32.47 |
| CDY07156 | Canola | nucleus | 26.24 | 32.26 |
| CDY07781 | Canola | nucleus | 18.66 | 29.91 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 22.16 | 29.57 |
| CDY53379 | Canola | nucleus | 18.08 | 28.31 |
| CDX87189 | Canola | nucleus | 20.12 | 27.6 |
| CDY29082 | Canola | nucleus | 18.66 | 26.67 |
| CDX80191 | Canola | nucleus | 19.83 | 26.46 |
| CDY50231 | Canola | nucleus | 19.24 | 26.09 |
| CDY04620 | Canola | nucleus | 19.24 | 25.98 |
| CDY31568 | Canola | nucleus | 19.53 | 25.97 |
| CDY16836 | Canola | nucleus | 20.12 | 25.84 |
| CDX90602 | Canola | nucleus | 18.08 | 25.73 |
| CDX71050 | Canola | nucleus | 18.95 | 25.69 |
| CDX73385 | Canola | nucleus | 22.45 | 25.5 |
| CDX79743 | Canola | nucleus | 21.57 | 25.26 |
| CDY02191 | Canola | nucleus | 21.57 | 25.17 |
| CDX77184 | Canola | nucleus | 18.66 | 25.0 |
| CDY09221 | Canola | nucleus | 18.66 | 24.81 |
| CDX78095 | Canola | nucleus | 17.49 | 24.79 |
| CDY16754 | Canola | nucleus | 24.49 | 24.71 |
| CDX87270 | Canola | nucleus | 24.49 | 24.63 |
| CDY00373 | Canola | nucleus | 18.66 | 24.62 |
| CDY59600 | Canola | nucleus | 17.49 | 24.59 |
| CDY61064 | Canola | nucleus | 18.66 | 24.52 |
| CDY08775 | Canola | nucleus | 13.99 | 24.49 |
| CDY69145 | Canola | nucleus, plastid | 22.45 | 24.44 |
| CDY40813 | Canola | nucleus | 20.12 | 24.38 |
| CDY65260 | Canola | nucleus | 21.87 | 24.27 |
| CDX88742 | Canola | nucleus | 19.53 | 24.19 |
| CDY00341 | Canola | nucleus | 25.95 | 24.18 |
| CDX93365 | Canola | nucleus | 21.57 | 23.95 |
| CDY42836 | Canola | nucleus | 19.83 | 23.78 |
| CDX74947 | Canola | nucleus | 22.45 | 23.69 |
| CDX84369 | Canola | nucleus | 25.36 | 23.45 |
| CDX91370 | Canola | nucleus | 21.87 | 23.08 |
| CDY40213 | Canola | nucleus | 22.16 | 21.41 |
| CDX95139 | Canola | nucleus | 20.41 | 20.83 |
| CDX76102 | Canola | nucleus | 23.03 | 20.73 |
| CDY15624 | Canola | nucleus | 20.12 | 20.66 |
| CDY31735 | Canola | nucleus | 20.7 | 20.64 |
| CDX77212 | Canola | nucleus | 20.41 | 20.59 |
| CDY70666 | Canola | nucleus | 17.49 | 20.2 |
| CDY72049 | Canola | nucleus | 17.49 | 20.2 |
| CDY35729 | Canola | nucleus | 17.2 | 19.73 |
| CDY40358 | Canola | nucleus | 18.95 | 19.52 |
| CDX90142 | Canola | nucleus | 17.49 | 18.99 |
| CDY70704 | Canola | nucleus | 20.12 | 18.9 |
| CDY33948 | Canola | nucleus | 16.62 | 18.87 |
| CDY06274 | Canola | nucleus | 17.2 | 18.79 |
| CDY37834 | Canola | nucleus | 16.62 | 18.75 |
| CDY55422 | Canola | nucleus | 21.87 | 18.7 |
| CDY61965 | Canola | nucleus | 16.91 | 18.65 |
| CDY70838 | Canola | nucleus | 16.62 | 18.63 |
| CDY55549 | Canola | nucleus | 21.57 | 18.41 |
| CDY70312 | Canola | nucleus | 15.16 | 18.31 |
| CDX80822 | Canola | nucleus | 21.57 | 18.23 |
| CDY04855 | Canola | nucleus | 21.28 | 17.98 |
| CDY66590 | Canola | nucleus | 16.91 | 17.74 |
| CDX81292 | Canola | nucleus | 14.58 | 17.73 |
| CDY15678 | Canola | nucleus | 16.62 | 17.43 |
| CDY08776 | Canola | nucleus | 2.04 | 8.14 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078DZB1 | EnsemblPlants:CDX92613 | ProteinID:CDX92613 | ProteinID:CDX92613.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00154414001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 |
| PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF78 | UniParc:UPI0004EE8E7D | InterPro:Znf_Dof | SEG:seg |
Description
BnaC07g38710D
Coordinates
chrLK031873:+:2553..4242
Molecular Weight (calculated)
37261.9 Da
IEP (calculated)
8.179
GRAVY (calculated)
-0.833
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTAQWPQEI VVKPLEEIVT NTCPKPQPSQ PQQPTPDGAA GGVERKARPE KDQAINCPRC NSTNTKFCYY NNYSLTQPRF FCKGCRRYWT EGGSLRNIPV
101: GGGSRKNKRS HSSSISSSDI GNNHSVSTQP ATKKHRSDQH HHHLMSMSQQ GLTGQNPKFL ETTQQDLNLG FPPHGLIRTN FTDLIHNIGN NNKSTNNLLL
201: SSSCSATSAM ATSPLDFIRN NNSNNGNSSF MGFPVHNQDP TSGGFSMQDH YKPCNSNTTL LGFSLDHHRN NDFPGGFQGG EGGDDVNGRP LFPFEDLKLP
301: VSSSSATSNV DINDHQKRAS GGDAAATSGG YWTGMLSGGG SWC
101: GGGSRKNKRS HSSSISSSDI GNNHSVSTQP ATKKHRSDQH HHHLMSMSQQ GLTGQNPKFL ETTQQDLNLG FPPHGLIRTN FTDLIHNIGN NNKSTNNLLL
201: SSSCSATSAM ATSPLDFIRN NNSNNGNSSF MGFPVHNQDP TSGGFSMQDH YKPCNSNTTL LGFSLDHHRN NDFPGGFQGG EGGDDVNGRP LFPFEDLKLP
301: VSSSSATSNV DINDHQKRAS GGDAAATSGG YWTGMLSGGG SWC
001: MDTAQWPQEI VVKPLEEIVT NTCPKPQPQP LQPQQPPSVG GERKARPEKD QAVNCPRCNS TNTKFCYYNN YSLTQPRYFC KGCRRYWTEG GSLRNIPVGG
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
Arabidopsis Description
DOF4.6Dof zinc finger protein DOF4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.