Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g082840.2.1 | Tomato | nucleus | 89.66 | 90.7 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 27.97 | 45.34 |
| PGSC0003DMT400048612 | Potato | nucleus | 43.3 | 41.7 |
| KRG92523 | Soybean | nucleus | 45.98 | 39.74 |
| GSMUA_Achr11P... | Banana | nucleus | 44.44 | 39.46 |
| PGSC0003DMT400000349 | Potato | nucleus | 38.31 | 37.74 |
| PGSC0003DMT400031928 | Potato | nucleus | 45.59 | 35.84 |
| KRH06442 | Soybean | nucleus | 37.55 | 35.51 |
| KRH34272 | Soybean | nucleus | 44.06 | 34.23 |
| KRH47883 | Soybean | nucleus | 37.55 | 34.15 |
| AT4G24060.1 | Thale cress | nucleus | 43.68 | 33.33 |
| CDY35454 | Canola | nucleus | 42.91 | 32.75 |
| CDY71684 | Canola | nucleus | 41.38 | 32.24 |
| CDY72657 | Canola | nucleus | 35.63 | 31.85 |
| CDY71763 | Canola | nucleus | 41.76 | 31.78 |
| CDX92613 | Canola | nucleus | 41.76 | 31.78 |
| CDY03494 | Canola | nucleus | 41.76 | 31.69 |
| Bra010548.1-P | Field mustard | nucleus | 42.53 | 31.53 |
| Bra019247.1-P | Field mustard | nucleus | 41.38 | 31.49 |
| Bra013758.1-P | Field mustard | nucleus | 39.08 | 30.36 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 28.35 | 28.79 |
| PGSC0003DMT400069680 | Potato | nucleus | 29.12 | 27.14 |
| PGSC0003DMT400019416 | Potato | nucleus | 31.03 | 26.82 |
| PGSC0003DMT400033382 | Potato | nucleus | 24.52 | 24.81 |
| PGSC0003DMT400065271 | Potato | nucleus | 27.97 | 24.41 |
| CDY24798 | Canola | nucleus | 42.15 | 24.28 |
| PGSC0003DMT400046598 | Potato | nucleus | 30.27 | 23.94 |
| PGSC0003DMT400058729 | Potato | nucleus | 18.01 | 23.86 |
| PGSC0003DMT400010397 | Potato | nucleus | 28.35 | 23.2 |
| PGSC0003DMT400076397 | Potato | nucleus | 25.29 | 23.16 |
| PGSC0003DMT400002060 | Potato | nucleus | 22.99 | 22.56 |
| PGSC0003DMT400075051 | Potato | nucleus | 24.9 | 22.34 |
| PGSC0003DMT400060216 | Potato | nucleus | 25.29 | 21.85 |
| PGSC0003DMT400001174 | Potato | nucleus | 20.69 | 21.09 |
| PGSC0003DMT400055052 | Potato | nucleus | 25.29 | 21.09 |
| PGSC0003DMT400025984 | Potato | nucleus | 22.22 | 20.71 |
| PGSC0003DMT400078164 | Potato | nucleus | 24.14 | 19.69 |
| PGSC0003DMT400049288 | Potato | nucleus | 27.2 | 18.98 |
| PGSC0003DMT400023033 | Potato | nucleus | 28.74 | 18.61 |
| PGSC0003DMT400041580 | Potato | nucleus | 26.82 | 18.52 |
| PGSC0003DMT400057782 | Potato | mitochondrion | 19.92 | 18.44 |
| PGSC0003DMT400076447 | Potato | nucleus | 26.05 | 17.09 |
Protein Annotations
| EntrezGene:102592238 | MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | UniProt:M1BLA6 |
| PFAM:PD007478 | PFAM:PF02701 | EnsemblPlantsGene:PGSC0003DMG400018541 | PGSC:PGSC0003DMG400018541 | EnsemblPlants:PGSC0003DMT400047705 | ScanProsite:PS01361 |
| PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF15 | UniParc:UPI000294B925 | RefSeq:XP_006350511.1 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
Dof zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018541]
Coordinates
chr3:-:48015263..48016543
Molecular Weight (calculated)
28656.8 Da
IEP (calculated)
8.198
GRAVY (calculated)
-0.800
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTSSQWPQG IGIVKGVDET SSKLDQRKPR PQKEQAVNCP RCNSTNTKFC YYNNYSLTQP RYFCKTCRRY WTEGGSLRNV PVGGGSRKNK RSNNNNINNN
101: SSSSSTTSSL SLSSSKKLFT DLANPNDLNL TYNPIPSTTT PGNFSSFSDF MALPLIHPSA NSASTFMPNN NLYTSSTTGL SNLHDLKHSN GINFSLDGFE
201: NGYGSLQGSS DHQEAKLFFP MDDLKINVST VDDQFEENRG QAADQSNGFW NGMLGGGGTS W
101: SSSSSTTSSL SLSSSKKLFT DLANPNDLNL TYNPIPSTTT PGNFSSFSDF MALPLIHPSA NSASTFMPNN NLYTSSTTGL SNLHDLKHSN GINFSLDGFE
201: NGYGSLQGSS DHQEAKLFFP MDDLKINVST VDDQFEENRG QAADQSNGFW NGMLGGGGTS W
001: MDTAQWPQEI VVKPLEEIVT NTCPKPQPQP LQPQQPPSVG GERKARPEKD QAVNCPRCNS TNTKFCYYNN YSLTQPRYFC KGCRRYWTEG GSLRNIPVGG
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
Arabidopsis Description
DOF4.6Dof zinc finger protein DOF4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.