Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g072500.1.1 | Tomato | nucleus | 85.95 | 90.18 |
| PGSC0003DMT400019416 | Potato | nucleus | 57.86 | 57.28 |
| VIT_06s0004g03420.t01 | Wine grape | nucleus | 52.84 | 53.38 |
| KRG89059 | Soybean | nucleus | 53.51 | 51.61 |
| KRH24943 | Soybean | nucleus | 51.84 | 50.82 |
| KRH22943 | Soybean | nucleus | 46.82 | 49.12 |
| KRH10402 | Soybean | nucleus | 46.49 | 48.77 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 38.8 | 42.65 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 38.8 | 39.86 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 31.77 | 34.67 |
| CDY53379 | Canola | nucleus | 22.07 | 30.14 |
| PGSC0003DMT400000349 | Potato | nucleus | 26.09 | 29.43 |
| PGSC0003DMT400048612 | Potato | nucleus | 26.42 | 29.15 |
| GSMUA_Achr11P... | Banana | nucleus | 25.42 | 28.68 |
| GSMUA_Achr10P... | Banana | nucleus | 26.09 | 28.68 |
| GSMUA_Achr10P... | Banana | nucleus | 26.76 | 28.07 |
| PGSC0003DMT400047705 | Potato | nucleus | 24.41 | 27.97 |
| PGSC0003DMT400058729 | Potato | nucleus | 17.39 | 26.4 |
| PGSC0003DMT400076397 | Potato | nucleus | 25.08 | 26.32 |
| Bra035696.1-P | Field mustard | nucleus | 22.41 | 26.17 |
| CDX77184 | Canola | nucleus | 22.41 | 26.17 |
| PGSC0003DMT400069680 | Potato | nucleus | 24.08 | 25.71 |
| PGSC0003DMT400075051 | Potato | nucleus | 24.08 | 24.74 |
| GSMUA_Achr11P... | Banana | nucleus | 24.08 | 24.32 |
| PGSC0003DMT400031928 | Potato | nucleus | 26.42 | 23.8 |
| PGSC0003DMT400033382 | Potato | nucleus | 20.4 | 23.64 |
| PGSC0003DMT400025984 | Potato | nucleus | 22.07 | 23.57 |
| PGSC0003DMT400046598 | Potato | nucleus | 25.75 | 23.33 |
| AT2G28510.1 | Thale cress | nucleus | 22.41 | 23.26 |
| PGSC0003DMT400002060 | Potato | nucleus | 20.07 | 22.56 |
| PGSC0003DMT400078164 | Potato | nucleus | 24.08 | 22.5 |
| PGSC0003DMT400060216 | Potato | nucleus | 22.41 | 22.19 |
| PGSC0003DMT400001174 | Potato | nucleus | 18.06 | 21.09 |
| PGSC0003DMT400010397 | Potato | nucleus | 22.41 | 21.0 |
| PGSC0003DMT400055052 | Potato | nucleus | 21.74 | 20.77 |
| PGSC0003DMT400057782 | Potato | mitochondrion | 18.39 | 19.5 |
| PGSC0003DMT400049288 | Potato | nucleus | 23.41 | 18.72 |
| PGSC0003DMT400023033 | Potato | nucleus | 24.75 | 18.36 |
| PGSC0003DMT400041580 | Potato | nucleus | 22.74 | 17.99 |
| PGSC0003DMT400076447 | Potato | nucleus | 22.74 | 17.09 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | UniProt:M1CDP1 | PFAM:PD007478 |
| PFAM:PF02701 | EnsemblPlantsGene:PGSC0003DMG400025372 | PGSC:PGSC0003DMG400025372 | EnsemblPlants:PGSC0003DMT400065271 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF69 | UniParc:UPI0002963AED | InterPro:Znf_Dof | SEG:seg | : |
Description
Dof domain, zinc finger family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400025372]
Coordinates
chr11:+:44330026..44332022
Molecular Weight (calculated)
33835.3 Da
IEP (calculated)
7.518
GRAVY (calculated)
-0.964
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHQQQEMSS QTLESMLVCT KPDQDQKKPR PAEQQPQKCP RCDSANTKFC YYNNYSLTQP RYFCKSCRRY WTKGGTLRNV PVGGGCRKNK KLSSTTSAKR
101: SSHDNISPNI SNPIPSYDSS TDLSLAFARL QKQTNAHLEI DQEHDNNNMS MMYNTGNNCT STTFLDALRG GFLENSPNHH GLFHHNMYNY ANMGQLVENG
201: EIGMSYDQDQ MSIGTSTTMM TSIVKQEMCN MARSAEGHDL NNSNNNNKVL CGFPWQQMNG DHHVNNMNTN DFEYSTNKQS WNGFGGSSNW HGLINSPLM
101: SSHDNISPNI SNPIPSYDSS TDLSLAFARL QKQTNAHLEI DQEHDNNNMS MMYNTGNNCT STTFLDALRG GFLENSPNHH GLFHHNMYNY ANMGQLVENG
201: EIGMSYDQDQ MSIGTSTTMM TSIVKQEMCN MARSAEGHDL NNSNNNNKVL CGFPWQQMNG DHHVNNMNTN DFEYSTNKQS WNGFGGSSNW HGLINSPLM
001: MDPEQEISNE TLETILVSST KGSNNNNKKM EEEMKKKVSR GELGGEAQNC PRCESPNTKF CYYNNYSLSQ PRYFCKSCRR YWTKGGTLRN VPVGGGCRRN
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
Arabidopsis Description
DOF2.1Dof zinc finger protein DOF2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LE43]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.